Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f11r
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p pro...    63   3e-10
AY061234-1|AAL28782.1|  547|Drosophila melanogaster LD17594p pro...    63   3e-10
BT003489-1|AAO39492.1|  441|Drosophila melanogaster SD23787p pro...    31   1.3  
AY051617-1|AAK93041.1|  587|Drosophila melanogaster GH26613p pro...    31   1.3  
AE014297-4090|AAN14403.1|  862|Drosophila melanogaster CG31064-P...    31   1.3  
AE014297-4089|AAN14402.1|  667|Drosophila melanogaster CG31064-P...    31   1.3  
AE014297-4088|AAN14401.1|  729|Drosophila melanogaster CG31064-P...    31   1.3  
BT015259-1|AAT94488.1| 1201|Drosophila melanogaster LD42253p pro...    29   9.0  

>BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p protein.
          Length = 841

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -3

Query: 739  DGGVQAQXXXXXXXXXXXXXXXGNQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFH 560
            D GVQ Q               GN  +T ++++ +I K+ EEL NL+ SEE +QI  H+ 
Sbjct: 755  DTGVQVQLYVELLNHYLFYFERGNSLITVAMLNQLIAKVNEELPNLEPSEETKQIESHYK 814

Query: 559  NTLQHLKNRIESPDPE-SLGYEGLTLS 482
            NTL H+++R+ES D    + + G+TL+
Sbjct: 815  NTLAHIRSRMESNDSSLEVSFAGITLN 841


>AY061234-1|AAL28782.1|  547|Drosophila melanogaster LD17594p
           protein.
          Length = 547

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -3

Query: 739 DGGVQAQXXXXXXXXXXXXXXXGNQSLTPSLIDAIIQKIREELANLDQSEEVEQITKHFH 560
           D GVQ Q               GN  +T ++++ +I K+ EEL NL+ SEE +QI  H+ 
Sbjct: 461 DTGVQVQLYVELLNHYLFYFERGNSLITVAMLNQLIAKVNEELPNLEPSEETKQIESHYK 520

Query: 559 NTLQHLKNRIESPDPE-SLGYEGLTLS 482
           NTL H+++R+ES D    + + G+TL+
Sbjct: 521 NTLAHIRSRMESNDSSLEVSFAGITLN 547


>BT003489-1|AAO39492.1|  441|Drosophila melanogaster SD23787p
           protein.
          Length = 441

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = -3

Query: 664 SLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIES 524
           S  P+L+DA  Q     +A LDQ   +E++ +H + T+ +L+ ++ES
Sbjct: 34  SAPPALLDATGQG--NMIAVLDQKNYIEELNRHLNATVGNLQAKVES 78


>AY051617-1|AAK93041.1|  587|Drosophila melanogaster GH26613p
           protein.
          Length = 587

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = -3

Query: 664 SLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIES 524
           S  P+L+DA  Q     +A LDQ   +E++ +H + T+ +L+ ++ES
Sbjct: 242 SAPPALLDATGQG--NMIAVLDQKNYIEELNRHLNATVGNLQAKVES 286


>AE014297-4090|AAN14403.1|  862|Drosophila melanogaster CG31064-PE,
           isoform E protein.
          Length = 862

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = -3

Query: 664 SLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIES 524
           S  P+L+DA  Q     +A LDQ   +E++ +H + T+ +L+ ++ES
Sbjct: 517 SAPPALLDATGQG--NMIAVLDQKNYIEELNRHLNATVGNLQAKVES 561


>AE014297-4089|AAN14402.1|  667|Drosophila melanogaster CG31064-PA,
           isoform A protein.
          Length = 667

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = -3

Query: 664 SLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIES 524
           S  P+L+DA  Q     +A LDQ   +E++ +H + T+ +L+ ++ES
Sbjct: 322 SAPPALLDATGQG--NMIAVLDQKNYIEELNRHLNATVGNLQAKVES 366


>AE014297-4088|AAN14401.1|  729|Drosophila melanogaster CG31064-PB,
           isoform B protein.
          Length = 729

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = -3

Query: 664 SLTPSLIDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIES 524
           S  P+L+DA  Q     +A LDQ   +E++ +H + T+ +L+ ++ES
Sbjct: 322 SAPPALLDATGQG--NMIAVLDQKNYIEELNRHLNATVGNLQAKVES 366


>BT015259-1|AAT94488.1| 1201|Drosophila melanogaster LD42253p
           protein.
          Length = 1201

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = -3

Query: 670 NQSLTPSL---IDAIIQKIREELANLDQSEEVEQITKHFHNTLQHLKNRIESPDPESLG 503
           N+S  P L   I++++++ R++   L   +  E ++KH    +Q     IE+  PE  G
Sbjct: 528 NESHRPDLDDKIESLMEEFRDKTDALILEKHAEYLSKHPKEVMQSQDREIEAQPPEENG 586


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,558,553
Number of Sequences: 53049
Number of extensions: 583731
Number of successful extensions: 1618
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)