Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f11f
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093036-1|AAH93036.1| 796|Homo sapiens vacuolar protein sortin... 262 7e-70
BC010362-1|AAH10362.1| 796|Homo sapiens vacuolar protein sortin... 262 7e-70
BC002414-1|AAH02414.1| 796|Homo sapiens vacuolar protein sortin... 262 7e-70
AK223218-1|BAD96938.1| 796|Homo sapiens vacuolar protein sortin... 262 7e-70
AK001614-1|BAA91790.1| 796|Homo sapiens protein ( Homo sapiens ... 262 7e-70
AF191298-1|AAF02778.2| 796|Homo sapiens vacuolar sorting protei... 262 7e-70
AF186382-1|AAG40619.1| 796|Homo sapiens vacuolar protein sortin... 262 7e-70
AF183418-1|AAG09687.1| 796|Homo sapiens maternal-embryonic 3 pr... 262 7e-70
AF175265-1|AAF89953.1| 796|Homo sapiens vacuolar sorting protei... 262 7e-70
AK023650-1|BAB14626.1| 661|Homo sapiens protein ( Homo sapiens ... 65 2e-10
AB209625-1|BAD92862.1| 459|Homo sapiens dynactin 1 isoform 1 va... 31 4.1
AK131454-1|BAD18599.1| 945|Homo sapiens protein ( Homo sapiens ... 30 7.1
>BC093036-1|AAH93036.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>BC010362-1|AAH10362.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>BC002414-1|AAH02414.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>AK223218-1|BAD96938.1| 796|Homo sapiens vacuolar protein sorting
35 variant protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>AK001614-1|BAA91790.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ10752 fis, clone NT2RP3004480, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>AF191298-1|AAF02778.2| 796|Homo sapiens vacuolar sorting protein
35 protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>AF186382-1|AAG40619.1| 796|Homo sapiens vacuolar protein sorting
35 protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>AF183418-1|AAG09687.1| 796|Homo sapiens maternal-embryonic 3
protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>AF175265-1|AAF89953.1| 796|Homo sapiens vacuolar sorting protein
35 protein.
Length = 796
Score = 262 bits (642), Expect = 7e-70
Identities = 124/161 (77%), Positives = 138/161 (85%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPD 163
>AK023650-1|BAB14626.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ13588 fis, clone PLACE1009298, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
Length = 661
Score = 64.9 bits (151), Expect = 2e-10
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 518 MCRGVQHPLRGLFLRNYLLQCTRNVLPD 601
MCRGVQHPLRGLFLRNYLLQCTRN LPD
Sbjct: 1 MCRGVQHPLRGLFLRNYLLQCTRNTLPD 28
>AB209625-1|BAD92862.1| 459|Homo sapiens dynactin 1 isoform 1
variant protein.
Length = 459
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 125 QVSPVEEQEKLLEEALNIV-KVQAFQMKRCLDKSKLMDALKH 247
+ SP++E+E L + ++ K++ ++KR DK+KL + KH
Sbjct: 35 EASPLQEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKH 76
>AK131454-1|BAD18599.1| 945|Homo sapiens protein ( Homo sapiens
cDNA FLJ16608 fis, clone TESTI4011070. ).
Length = 945
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 418 EHCT*IVPVNHSRTGLHQNKHESAKRSIEGSG*DVSRSSASFERTFP*ELPIAVHKE 588
E C ++P S T + +H+ ++ ++E S + S+S E FP E IA+ E
Sbjct: 245 EVCDSLIPSTSSMTHVSDTEHKESETAVETSTPKIKTGSSSLEGQFPNE-GIAIDME 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,875,649
Number of Sequences: 237096
Number of extensions: 2178758
Number of successful extensions: 8562
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8562
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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