Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f11f
(601 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 29 0.046
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 29 0.046
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.3
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 3.0
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 4.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 4.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 4.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 5.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.3
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 28.7 bits (61), Expect = 0.046
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 482 NLRRDLLKDLVEMCRGVQHPLRGLFLRNYLL 574
NL++D+ L +C + + RG+F +NYLL
Sbjct: 346 NLQKDVCSKLKGLCPSMANYDRGVFYKNYLL 376
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 28.7 bits (61), Expect = 0.046
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 482 NLRRDLLKDLVEMCRGVQHPLRGLFLRNYLL 574
NL++D+ L +C + + RG+F +NYLL
Sbjct: 436 NLQKDVCSKLKGLCPSMANYDRGVFYKNYLL 466
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 366 SKREGRLQIFMNWSNMLGTLYLD 434
SKR L +F +WSN L+ D
Sbjct: 662 SKRPDLLHLFGSWSNRPNLLFKD 684
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 366 SKREGRLQIFMNWSNMLGTLYLD 434
SKR L +F +WSN L+ D
Sbjct: 662 SKRPDLLHLFGSWSNRPNLLFKD 684
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 366 SKREGRLQIFMNWSNMLGTLYLD 434
SKR L +F +WSN L+ D
Sbjct: 662 SKRPDLLHLFGSWSNRPNLLFKD 684
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 3.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 370 KGKEGCRSL*TGPICWEH 423
KGK+ C+ GP+ W++
Sbjct: 340 KGKDACQMDSGGPVLWQN 357
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 407 GPVHKDLQPSFPFGTPPEDTAPG 339
G VH + +GTP E+ PG
Sbjct: 7 GKVHFGVDDVSLYGTPKEEPGPG 29
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 407 GPVHKDLQPSFPFGTPPEDTAPG 339
G VH + +GTP E+ PG
Sbjct: 7 GKVHFGVDDVSLYGTPKEEPGPG 29
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 407 GPVHKDLQPSFPFGTPPEDTAPG 339
G VH + +GTP E+ PG
Sbjct: 7 GKVHFGVDDVSLYGTPKEEPGPG 29
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 56 NLQKNLIWFFNCIGLVTQAQMTNQVSP 136
NL+ LI+F IGL T Q P
Sbjct: 215 NLENKLIYFIEDIGLNTYYFFLRQAFP 241
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 581 CTAIGNS*GKVLSKDAELR 525
C A NS G+VLS+D ++R
Sbjct: 108 CVA-SNSVGRVLSRDVQVR 125
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 581 CTAIGNS*GKVLSKDAELR 525
C A NS G+VLS+D ++R
Sbjct: 108 CVA-SNSVGRVLSRDVQVR 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,742
Number of Sequences: 438
Number of extensions: 3777
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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