Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f10r
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.4  
AY278446-1|AAP37003.1|  151|Anopheles gambiae microsomal glutath...    24   5.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   5.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.7  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 179 NLAVCLQKVSKHSFSESQLTSVTR-RTKYVGKAPTNG 286
           N  VC +  S H+  +  +  V R R  YVG +P NG
Sbjct: 194 NWRVCDETPSDHNTIKFVVGRVPRQRANYVGHSPVNG 230


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -2

Query: 273 ALPTYLVRLVTEVNWDSEKECFETFCRQTAKFYAQPNPDPNVESVSSEHRRQEHVI 106
           A+   L  L+ EV+  S++E FE    Q        NP   ++  + EHR+QE V+
Sbjct: 551 AMARILYVLLYEVS-RSQRE-FEFISPQYTVDKVATNPQNCLKQTTIEHRKQEEVL 604


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -2

Query: 477 FVLGLNGSTQNSEQDSELGDTGEMAQHMTQLLLSKRAML 361
           FV+G + +  ++  +++LG+ GE  +   +L+LS  A +
Sbjct: 114 FVIGGDFNAWSASWNNQLGERGETQKRRGELVLSTFAQI 152


>AY278446-1|AAP37003.1|  151|Anopheles gambiae microsomal
           glutathione transferase GSTMIC1protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -2

Query: 192 QTAKFYAQPN-PDPNVESVSSEHRRQEHVIFP 100
           Q +K  AQP   DP+VE V   HR     I P
Sbjct: 51  QPSKKGAQPKFDDPDVERVRRAHRNDLENILP 82


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 535 RFSKLRFHQTVESIAIGRIICSW 467
           R S +    TV++I   +I+CSW
Sbjct: 229 RISFIESSATVQNILTHKIVCSW 251


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 519 GFIKLSNPLPLEELFVLGLNGSTQNS 442
           GFI+ + PLPL      G   S+ NS
Sbjct: 339 GFIQRAIPLPLNPTGAAGTTNSSANS 364


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,136
Number of Sequences: 2352
Number of extensions: 14944
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)