Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f10f
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068257-1|AAC19117.1| 663|Drosophila melanogaster mutL homolog... 255 3e-68
AE013599-613|AAF59117.1| 664|Drosophila melanogaster CG11482-PA... 255 3e-68
AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p pro... 106 3e-23
AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA... 106 3e-23
AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog... 104 9e-23
AY058322-1|AAL13551.1| 684|Drosophila melanogaster GH09291p pro... 31 1.3
AJ577475-1|CAE12059.1| 1342|Drosophila melanogaster polo kinase ... 31 1.3
AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA... 31 1.3
AE013599-3860|AAS64767.1| 1703|Drosophila melanogaster CG4527-PD... 31 1.3
AE013599-3859|AAS64766.1| 1703|Drosophila melanogaster CG4527-PC... 31 1.3
AE013599-3858|AAF47198.2| 1703|Drosophila melanogaster CG4527-PB... 31 1.3
AE013599-3857|AAX52684.1| 1342|Drosophila melanogaster CG4527-PE... 31 1.3
BT025217-1|ABF17908.1| 558|Drosophila melanogaster FI01024p pro... 30 3.1
AJ245859-1|CAB64938.1| 558|Drosophila melanogaster putative DNA... 30 3.1
AE014134-1521|AAF52681.2| 558|Drosophila melanogaster CG9233-PA... 30 3.1
AY118834-1|AAM50694.1| 543|Drosophila melanogaster GM02023p pro... 28 9.4
AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA... 28 9.4
>AF068257-1|AAC19117.1| 663|Drosophila melanogaster mutL homolog
protein.
Length = 663
Score = 255 bits (625), Expect = 3e-68
Identities = 120/164 (73%), Positives = 143/164 (87%)
Frame = +3
Query: 150 EPGIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQD 329
+PG+IRKL E VVNRIAAGEI+QRPANALKEL+ENSLDA+ST+I + VK+GGLK LQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 330 NGTGIRNEDLDIVCERFTTSKLRKYEDLQEISTYGFRGEALASISHIAHLTILTKTAQDK 509
NGTGIR EDL IVCERFTTSKL ++EDL +I+T+GFRGEALASISH+AHL+I TKTA++K
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 510 CAYKASYENGKLKGPIKACAGNNGTQITVEDLFYNVVARKGALR 641
C YKA+Y +GKL+G K CAGN GT I +EDLFYN+ R+ ALR
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALR 169
>AE013599-613|AAF59117.1| 664|Drosophila melanogaster CG11482-PA
protein.
Length = 664
Score = 255 bits (625), Expect = 3e-68
Identities = 120/164 (73%), Positives = 143/164 (87%)
Frame = +3
Query: 150 EPGIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQD 329
+PG+IRKL E VVNRIAAGEI+QRPANALKEL+ENSLDA+ST+I + VK+GGLK LQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 330 NGTGIRNEDLDIVCERFTTSKLRKYEDLQEISTYGFRGEALASISHIAHLTILTKTAQDK 509
NGTGIR EDL IVCERFTTSKL ++EDL +I+T+GFRGEALASISH+AHL+I TKTA++K
Sbjct: 66 NGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEK 125
Query: 510 CAYKASYENGKLKGPIKACAGNNGTQITVEDLFYNVVARKGALR 641
C YKA+Y +GKL+G K CAGN GT I +EDLFYN+ R+ ALR
Sbjct: 126 CGYKATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALR 169
>AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p
protein.
Length = 895
Score = 106 bits (254), Expect = 3e-23
Identities = 53/159 (33%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = +3
Query: 156 GIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNG 335
G I+ + ++ V++I +G++V A A+KEL+ENS+DA +T + I +K GL+ +++ DNG
Sbjct: 25 GQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNG 84
Query: 336 TGIRNEDLDIVCERFTTSKLRKYEDLQEISTYGFRGEALASISHIAHLTILTKTAQDKCA 515
+G+ +L+ + ++ TSK+R++ DL + T+GFRGEAL+S+ ++ + I T+
Sbjct: 85 SGVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVG 144
Query: 516 YKASYEN-GKLKGPIKACAGNNGTQITVEDLFYNVVARK 629
K ++ G++K CA GT + + +LF + R+
Sbjct: 145 VKVELDHEGRIK-KRSPCARGVGTTVLLANLFSTLPVRR 182
>AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA
protein.
Length = 899
Score = 106 bits (254), Expect = 3e-23
Identities = 53/159 (33%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = +3
Query: 156 GIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNG 335
G I+ + ++ V++I +G++V A A+KEL+ENS+DA +T + I +K GL+ +++ DNG
Sbjct: 25 GQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNG 84
Query: 336 TGIRNEDLDIVCERFTTSKLRKYEDLQEISTYGFRGEALASISHIAHLTILTKTAQDKCA 515
+G+ +L+ + ++ TSK+R++ DL + T+GFRGEAL+S+ ++ + I T+
Sbjct: 85 SGVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVG 144
Query: 516 YKASYEN-GKLKGPIKACAGNNGTQITVEDLFYNVVARK 629
K ++ G++K CA GT + + +LF + R+
Sbjct: 145 VKVELDHEGRIK-KRSPCARGVGTTVLLANLFSTLPVRR 182
>AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog
PMS2 protein.
Length = 893
Score = 104 bits (250), Expect = 9e-23
Identities = 54/159 (33%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Frame = +3
Query: 156 GIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNG 335
G I+ + ++ V++I +G++V A A+KEL+ENS+DA +T + I +K GL+ +++ DNG
Sbjct: 25 GQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNG 84
Query: 336 TGIRNEDLDIVCERFTTSKLRKYEDLQEISTYGFRGEALASISHIAHLTILTK-TAQDKC 512
+G+ +L+ + ++ TSK+R++ DL + T+GFRGEAL+S+ ++ + I T+ + D
Sbjct: 85 SGVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDGV 144
Query: 513 AYKASYENGKLKGPIKACAGNNGTQITVEDLFYNVVARK 629
+ +E G++K CA GT + + +LF + R+
Sbjct: 145 KVELDHE-GRIK-KRSPCARGVGTTVLLANLFSTLPVRR 181
>AY058322-1|AAL13551.1| 684|Drosophila melanogaster GH09291p
protein.
Length = 684
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 ITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYEDLQEI-STYGFRG-EALAS 458
+ VK + ++ Q NG GI ED++I+ RF K L E S G RG E L
Sbjct: 128 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEKRSPDSSLSENGSVRGRRGIEVLVG 187
Query: 459 ISHIAHL-TILTKTAQD 506
S + + +I T T+Q+
Sbjct: 188 GSGGSDVDSIGTNTSQE 204
>AJ577475-1|CAE12059.1| 1342|Drosophila melanogaster polo kinase
kinase 1 protein.
Length = 1342
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 ITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYEDLQEI-STYGFRG-EALAS 458
+ VK + ++ Q NG GI ED++I+ RF K L E S G RG E L
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEKRSPDSSLSENGSVRGRRGIEVLVG 803
Query: 459 ISHIAHL-TILTKTAQD 506
S + + +I T T+Q+
Sbjct: 804 GSGGSDVDSIGTNTSQE 820
>AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA,
isoform A protein.
Length = 1300
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 ITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYEDLQEI-STYGFRG-EALAS 458
+ VK + ++ Q NG GI ED++I+ RF K L E S G RG E L
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEKRSPDSSLSENGSVRGRRGIEVLVG 803
Query: 459 ISHIAHL-TILTKTAQD 506
S + + +I T T+Q+
Sbjct: 804 GSGGSDVDSIGTNTSQE 820
>AE013599-3860|AAS64767.1| 1703|Drosophila melanogaster CG4527-PD,
isoform D protein.
Length = 1703
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 ITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYEDLQEI-STYGFRG-EALAS 458
+ VK + ++ Q NG GI ED++I+ RF K L E S G RG E L
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEKRSPDSSLSENGSVRGRRGIEVLVG 803
Query: 459 ISHIAHL-TILTKTAQD 506
S + + +I T T+Q+
Sbjct: 804 GSGGSDVDSIGTNTSQE 820
>AE013599-3859|AAS64766.1| 1703|Drosophila melanogaster CG4527-PC,
isoform C protein.
Length = 1703
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 ITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYEDLQEI-STYGFRG-EALAS 458
+ VK + ++ Q NG GI ED++I+ RF K L E S G RG E L
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEKRSPDSSLSENGSVRGRRGIEVLVG 803
Query: 459 ISHIAHL-TILTKTAQD 506
S + + +I T T+Q+
Sbjct: 804 GSGGSDVDSIGTNTSQE 820
>AE013599-3858|AAF47198.2| 1703|Drosophila melanogaster CG4527-PB,
isoform B protein.
Length = 1703
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 ITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYEDLQEI-STYGFRG-EALAS 458
+ VK + ++ Q NG GI ED++I+ RF K L E S G RG E L
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEKRSPDSSLSENGSVRGRRGIEVLVG 803
Query: 459 ISHIAHL-TILTKTAQD 506
S + + +I T T+Q+
Sbjct: 804 GSGGSDVDSIGTNTSQE 820
>AE013599-3857|AAX52684.1| 1342|Drosophila melanogaster CG4527-PE,
isoform E protein.
Length = 1342
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 285 ITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYEDLQEI-STYGFRG-EALAS 458
+ VK + ++ Q NG GI ED++I+ RF K L E S G RG E L
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEKRSPDSSLSENGSVRGRRGIEVLVG 803
Query: 459 ISHIAHL-TILTKTAQD 506
S + + +I T T+Q+
Sbjct: 804 GSGGSDVDSIGTNTSQE 820
>BT025217-1|ABF17908.1| 558|Drosophila melanogaster FI01024p
protein.
Length = 558
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 597 QRLSECRCCQHKL-LWGLSVFHFHMRLCKHICLVQFLSIL*GVQYD 463
Q +S CR C H L++F ++ CK + + + L VQYD
Sbjct: 12 QDVSTCRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYD 57
>AJ245859-1|CAB64938.1| 558|Drosophila melanogaster putative DNA
binding protein protein.
Length = 558
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 597 QRLSECRCCQHKL-LWGLSVFHFHMRLCKHICLVQFLSIL*GVQYD 463
Q +S CR C H L++F ++ CK + + + L VQYD
Sbjct: 12 QDVSTCRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYD 57
>AE014134-1521|AAF52681.2| 558|Drosophila melanogaster CG9233-PA
protein.
Length = 558
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 597 QRLSECRCCQHKL-LWGLSVFHFHMRLCKHICLVQFLSIL*GVQYD 463
Q +S CR C H L++F ++ CK + + + L VQYD
Sbjct: 12 QDVSTCRLCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYD 57
>AY118834-1|AAM50694.1| 543|Drosophila melanogaster GM02023p
protein.
Length = 543
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +3
Query: 231 ALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYED 410
A++ + E+S ST +I+ GGL QD G ++ + + +R LR +
Sbjct: 450 AVEGMEESSAKKSSTKLILYKNDGGLSVKLSQDEGANSESQKSENISDRLRRRILRGSAN 509
Query: 411 LQEIST 428
E +T
Sbjct: 510 QSEDAT 515
>AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA
protein.
Length = 2171
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +3
Query: 231 ALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNGTGIRNEDLDIVCERFTTSKLRKYED 410
A++ + E+S ST +I+ GGL QD G ++ + + +R LR +
Sbjct: 2078 AVEGMEESSAKKSSTKLILYKNDGGLSVKLSQDEGANSESQKSENISDRLRRRILRGSAN 2137
Query: 411 LQEIST 428
E +T
Sbjct: 2138 QSEDAT 2143
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,227,493
Number of Sequences: 53049
Number of extensions: 534802
Number of successful extensions: 1282
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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