Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f07r
         (746 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_UPI00006CBB8B Cluster: hypothetical protein TTHERM_0056...    33   5.6  
UniRef50_Q7RPD9 Cluster: Putative uncharacterized protein PY0152...    33   5.6  
UniRef50_A5K4P1 Cluster: Asparagine-rich protein, putative; n=1;...    33   7.5  

>UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 2215

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 514 KGKKQLHVNQFE*INVFQLNRSR*LQKKIIL-RSVCLFMSKMLNELNDSPTFLSK 675
           KG     +NQFE +  F    S  L+ K IL  SV L  S+ L+   D P FLSK
Sbjct: 790 KGPSNFELNQFENLIYFSSKSSNLLKNKFILGNSVILVESRPLSSYLDYPLFLSK 844


>UniRef50_UPI00006CBB8B Cluster: hypothetical protein TTHERM_00566870;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00566870 - Tetrahymena thermophila SB210
          Length = 1385

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = +2

Query: 425  NSLRSKIYLALHYLYEISPFILKVSSYSIKKEKNSFMSISSNRSMFSN*IDRGSFKKKSF 604
            N +R   Y  L + Y IS    + S+Y+  +E+++F++ + N  +F N I+    + +S+
Sbjct: 1082 NQIRKGEYKQLTHPYNISEPTFQSSNYNHNREESNFLASNENNDIFQNKIEDLQLENQSY 1141


>UniRef50_Q7RPD9 Cluster: Putative uncharacterized protein PY01520;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01520 - Plasmodium yoelii yoelii
          Length = 1768

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 737 EKVRKLALSVQIAYSNLERNCFDKNVGLSFNSFNILDINKQTLLRMIFF*SYLDRFNW 564
           EK+RK+ +S  IA   +E+   DK++     + ++  I K   +R IF   + ++FNW
Sbjct: 646 EKIRKIKMSTNIAVKKVEKKKKDKDIKQKGKNKSVFQIKK---IRKIF---WFEKFNW 697


>UniRef50_A5K4P1 Cluster: Asparagine-rich protein, putative; n=1;
           Plasmodium vivax|Rep: Asparagine-rich protein, putative
           - Plasmodium vivax
          Length = 1974

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 514 KGKKQLHVNQFE*INVFQLNRSR*LQKKIILRSVCLFMSKMLNELNDSPTF 666
           KGKK+  VN    +N+++  + +  +KKI     CL      N LND   +
Sbjct: 645 KGKKRTCVNSRSDMNIYKKEKKKENKKKIFTHEYCLLSKTARNILNDEENY 695


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,307,317
Number of Sequences: 1657284
Number of extensions: 10129953
Number of successful extensions: 18431
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18430
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)