Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f06f
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.68 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    25   0.68 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.68 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.3  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   8.4  

>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 483 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 352
           LP DS   L L V +  S  V LN++A++   T   V  +   F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 483 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 352
           LP DS   L L V +  S  V LN++A++   T   V  +   F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 294 GLQGHRPGLFPS*VQTYLRRK 356
           G+ GH  GL+PS V T   +K
Sbjct: 215 GVTGHHSGLYPSAVDTTTNQK 235


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 483 LPADSRACLVLAVAVGRSAIVALNIIAQ 400
           LP DS   L L V +  S  V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 483 LPADSRACLVLAVAVGRSAIVALNIIAQ 400
           LP DS   L L V +  S  V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 483 LPADSRACLVLAVAVGRSAIVALNIIAQ 400
           LP DS   L L V +  S  V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 89  MLQIPTSLTTFWRSSFTIASSSPITTVRLKRA 184
           +L IPT   T  +SSF+I+S  P T +   ++
Sbjct: 8   ILVIPTMARTPLKSSFSISSILPETALEAPKS 39


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +1

Query: 322 FPVEFRLIFAENAIKLMYKRDGLALTLS 405
           FP+++ L+F+E  + L++K   + + +S
Sbjct: 701 FPIDYSLVFSETKL-LLFKITSVMIAVS 727


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +1

Query: 361 IKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRV 474
           IKL+ +++     LS+D   ++ +   G+ KDK  P++
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 566 ALTGTATIWPSES 604
           A+TGT T+ PS+S
Sbjct: 270 AMTGTKTVMPSQS 282


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 385 GLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 477
           G   TLSN  +     PA G GK+ T  + S
Sbjct: 335 GRTFTLSNTAKFGVHAPASGGGKEGTYTKES 365


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 308 MSLEPWSQS**AYSMQFILLFRISLFTTFVMTSLFF 201
           +S+EP   S   YS+ +ILLF + +  + V  + F+
Sbjct: 21  VSVEPTGFSPKGYSLLWILLFTLGVTISGVYRTDFY 56


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 77  WHLCMLQIPTSLTTFWRSS 133
           +H+ M  +PT L +F++S+
Sbjct: 59  YHIFMHIVPTKLISFYKST 77


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 375 VHKLNRVFGEDKSELNWETIPDDVL 301
           VH ++R  GED        IP D +
Sbjct: 62  VHLISRALGEDVRTQKGYLIPKDTI 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,932
Number of Sequences: 336
Number of extensions: 2291
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)