Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f04r
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 97 3e-20
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 97 3e-20
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 97 3e-20
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 97 3e-20
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 97 3e-20
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 97 3e-20
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 97 3e-20
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 97 3e-20
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 1.9
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 1.9
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 1.9
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 30 4.3
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 30 4.3
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 30 4.3
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 30 4.3
U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein. 29 5.7
BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence si... 29 5.7
AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein. 29 5.7
AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens ... 29 5.7
X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288... 29 10.0
X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globu... 29 10.0
X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for ... 29 10.0
X05792-1|CAA29234.1| 282|Homo sapiens sex steroid-binding prote... 29 10.0
X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for ... 29 10.0
M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globu... 29 10.0
BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding glo... 29 10.0
BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding glo... 29 10.0
BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein. 29 10.0
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 29 10.0
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 96.7 bits (230), Expect = 3e-20
Identities = 52/115 (45%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = -1
Query: 382 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 203
MRYVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 202 KLSSMPVGGGXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGFGLFD 47
KL+S+P GG DMGFGLFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 343 GKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 185
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 343 GKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 185
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 343 GKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 185
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 177 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSASASIPTELRIFSTSAAAGVVLPPST 353
PP+ + S P+ SC+ LP +S T L+ S + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 354 ASKYAA 371
+ +A+
Sbjct: 723 SHTHAS 728
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 177 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSASASIPTELRIFSTSAAAGVVLPPST 353
PP+ + S P+ SC+ LP +S T L+ S + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 354 ASKYAA 371
+ +A+
Sbjct: 723 SHTHAS 728
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 177 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSASASIPTELRIFSTSAAAGVVLPPST 353
PP+ + S P+ SC+ LP +S T L+ S + + + L +S +A L ST
Sbjct: 141 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 200
Query: 354 ASKYAA 371
+ +A+
Sbjct: 201 SHTHAS 206
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 177 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSASASIPTELRIFSTSAAAGVVLPPST 353
PP+ + S P+ SC+ LP +S T L+ S + + + L +S +A L ST
Sbjct: 301 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 360
Query: 354 ASKYAA 371
+ +A+
Sbjct: 361 SHTHAS 366
>U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein.
Length = 264
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 192 DDSFSRPAAISCSTSLPLSSVITF-LSFSASASIPTELRIFSTSA 323
D RP AISC ++ SS I + + F S+ +P ++ ST+A
Sbjct: 126 DSGGIRPCAISCDKNVTTSSAICWHMGFWLSSILPASGKLVSTTA 170
>BC009431-1|AAH09431.1| 559|Homo sapiens family with sequence
similarity 55, member C protein.
Length = 559
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 409 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 257
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AY358207-1|AAQ88574.1| 559|Homo sapiens WTNF5791 protein.
Length = 559
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 409 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 257
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>AK054664-1|BAB70787.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ30102 fis, clone BNGH41000137, weakly similar to
BRUSH BORDER 61.9 KD PROTEIN PRECURSOR. ).
Length = 559
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 409 RFVSIRT*KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKV 257
RF ++ + ++ YVA L ++GGK T A V S+ +E +L+ +
Sbjct: 413 RFTTVFSNELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNI 463
>X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288
AA) protein.
Length = 288
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 202 SASAPTSLRSCDVESNPGIFLPPGTQAEF 230
>X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globulin
(SHBG) protein.
Length = 402
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for sex
hormon binding globulin (SHBG). ).
Length = 356
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 161 SASAPTSLRSCDVESNPGIFLPPGTQAEF 189
>X05792-1|CAA29234.1| 282|Homo sapiens sex steroid-binding protein
protein.
Length = 282
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 87 SASAPTSLRSCDVESNPGIFLPPGTQAEF 115
>X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for sex
hormone-binding globulin (SHBG). ).
Length = 381
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 186 SASAPTSLRSCDVESNPGIFLPPGTQAEF 214
>M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globulin
protein.
Length = 402
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 207 SASAPTSLRSCDVESNPGIFLPPGTQAEF 235
>BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein.
Length = 401
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 279 SASIPTELRIFSTSAAAGVVLPPSTASKY 365
SAS PT LR + G+ LPP T +++
Sbjct: 206 SASAPTSLRSCDVESNPGIFLPPGTQAEF 234
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +3
Query: 219 ISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 359
+ +T++P ++V T +S + ++PT + + +T++ P+T S
Sbjct: 150 VPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVPTTTSIPTTTS 196
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,036,037
Number of Sequences: 237096
Number of extensions: 678410
Number of successful extensions: 1853
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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