Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12f04f
(507 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 109 2e-24
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 109 2e-24
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 109 2e-24
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 109 3e-24
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 109 3e-24
Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein. 33 0.22
AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-P... 33 0.22
BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p pro... 31 0.90
AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p pro... 31 0.90
AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA... 31 0.90
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 31 1.2
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 31 1.2
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 31 1.2
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 29 3.6
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 29 3.6
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 29 3.6
AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-P... 29 3.6
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 29 3.6
AY058297-1|AAL13526.1| 543|Drosophila melanogaster GH05942p pro... 29 4.8
AE014296-1660|AAF50267.2| 543|Drosophila melanogaster CG3529-PB... 29 4.8
AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-P... 28 6.3
AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-P... 28 6.3
AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-P... 28 6.3
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 109 bits (262), Expect = 2e-24
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 76 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 255
MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 256 KLSSMPVGGG 285
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 109 bits (262), Expect = 2e-24
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 76 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 255
MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 256 KLSSMPVGGG 285
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 109 bits (262), Expect = 2e-24
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 76 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 255
MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 256 KLSSMPVGGG 285
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 109 bits (261), Expect = 3e-24
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 76 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 255
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 256 KLSSMPVGGG 285
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 109 bits (261), Expect = 3e-24
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 76 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 255
MRYVAAYLLAVLGGK +PA D+EKILSSVG+E DAE+L KVI EL GK ++ LI GRE
Sbjct: 1 MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 256 KLSSMPVGGG 285
KLSSMPVGGG
Sbjct: 61 KLSSMPVGGG 70
>Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein.
Length = 644
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -2
Query: 254 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 99
S P++ S S S+ S +F S SAS S PT T+AAAG + T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199
>AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-PA
protein.
Length = 644
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -2
Query: 254 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 99
S P++ S S S+ S +F S SAS S PT T+AAAG + T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199
>BT003783-1|AAO41464.1| 994|Drosophila melanogaster LP02833p
protein.
Length = 994
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 35 LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 136
++AL +C LGL+ C+T + W+A+P P
Sbjct: 783 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 816
>AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p
protein.
Length = 315
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -2
Query: 254 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVV 120
S P++ S S S+ S +F S SAS S PT T+AAAG +
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGAL 192
>AE014297-1651|AAF54925.1| 988|Drosophila melanogaster CG8773-PA
protein.
Length = 988
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 35 LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 136
++AL +C LGL+ C+T + W+A+P P
Sbjct: 777 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 810
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 284 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 129
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 284 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 129
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 284 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 129
PPP GI++ + + + LPL+ + T + S+S++ T I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 225 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLA 115
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 225 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLA 115
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 225 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLA 115
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-PA
protein.
Length = 977
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 142 VEKILSSVGIEADAEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 282
V KIL G++ ++ +K++ +T +GK +LI L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 225 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLA 115
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AY058297-1|AAL13526.1| 543|Drosophila melanogaster GH05942p
protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 97 LLAVLGGKTTPAAADVEKILSSVGIEADAEK 189
L+ ++G K P AA EK+LS + I ADA K
Sbjct: 105 LVKLIGPKNDPPAAMQEKVLSLIQIWADAFK 135
>AE014296-1660|AAF50267.2| 543|Drosophila melanogaster CG3529-PB
protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 97 LLAVLGGKTTPAAADVEKILSSVGIEADAEK 189
L+ ++G K P AA EK+LS + I ADA K
Sbjct: 105 LVKLIGPKNDPPAAMQEKVLSLIQIWADAFK 135
>AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-PA
protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 248 PAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLP 114
P S +L +V TF++ + S + PT + ++ T + +V+P
Sbjct: 154 PIPTSTMATLQAQTVATFIAATGSKNRPTTIVVYPTVSPESIVIP 198
>AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-PA
protein.
Length = 157
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 260 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 99
S S P++ S STS P S+ T S S +S + STS+ PST+S
Sbjct: 47 SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
>AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-PA
protein.
Length = 157
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 260 SFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 99
S S P++ S STS P S+ T S S +S + STS+ PST+S
Sbjct: 47 SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,138,870
Number of Sequences: 53049
Number of extensions: 256869
Number of successful extensions: 756
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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