Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f03r
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.73 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    26   1.3  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   2.9  
AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding pr...    25   2.9  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    24   5.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.0  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   9.0  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 373  EVHQMSLERVLVAIETCSHKLSLLLPSWQLQADYGLQMILHSFDEMP 513
            ++ ++  E++L  IET   +    LP WQLQ      + LH   E P
Sbjct: 1004 KMKRLEFEQILQTIETKLQETKDTLPHWQLQLK---PLKLHEIPEEP 1047


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 664 VSEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDV 548
           + + + R  YH  +  +S  ++ +A L HKYN+   T+V
Sbjct: 539 IVDNNGRVLYHPDLRPLSDNDQYSATLKHKYNSVDLTEV 577



 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 157  LKFYFDSKIYNFINVKAINNFFFFCCKTCPLSEIDIFTL 41
            L+F  +S   +FIN+ +       C K C   E+D + L
Sbjct: 919  LQFLHESLFKHFINITSKCTASTTCKKNCASDELDCYLL 957


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 545 SYIC*AVSIVLVHQSCCNAIESAHRVHCSVIC 640
           S +C AVS V+   +C    +SA+ V C+ +C
Sbjct: 26  SSVC-AVSFVMQCSTCNAPTDSANSVSCAGVC 56


>AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding
           protein AgamOBP19 protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 562 REHCTCASILLQC 600
           ++HC  A+ILLQC
Sbjct: 113 KDHCEAATILLQC 125


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3

Query: 345 LRTVKILRNKKDIRLGSLVLWRRVTAQPA 259
           L TV  LR +     G  V WR  TAQPA
Sbjct: 4   LTTVNSLRFRP---FGGAVRWRSATAQPA 29


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 38   NEGKNIDFR*WTSFATKKKEVIY 106
            N+GKN+  R   SF   +K V++
Sbjct: 1192 NDGKNVFVRSMDSFGITRKHVVW 1214


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 38   NEGKNIDFR*WTSFATKKKEVIY 106
            N+GKN+  R   SF   +K V++
Sbjct: 1193 NDGKNVFVRSMDSFGITRKHVVW 1215


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
 Frame = -2

Query: 484 FVIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGL--LICLPREQAAAYCKDIEKQEG 311
           F   N   +  +  + KA  N+F + Q +   T+GG     CLP        + + +   
Sbjct: 638 FTEENFACLIAVIFIYKAIENVFHIGQEYPLNTAGGKYDCACLPPATHELTPEAVHQWAQ 697

Query: 310 YQAWIIGIVEKGNRTARIIDKPRVI 236
           Y       + KG  T    DKP  +
Sbjct: 698 YDLRTCKTL-KGTLTGADCDKPEYV 721


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,305
Number of Sequences: 2352
Number of extensions: 12774
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)