Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f03r
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095058-1|AAM11386.1|  398|Drosophila melanogaster LD46437p pro...   307   8e-84
AJ000672-1|CAA04229.1|  398|Drosophila melanogaster SelD protein...   307   8e-84
AE013599-1864|AAM70998.1|  398|Drosophila melanogaster CG8553-PB...   307   8e-84
AE013599-1863|AAF58266.1|  398|Drosophila melanogaster CG8553-PA...   307   8e-84
U91994-1|AAB88790.1|  398|Drosophila melanogaster selenophosphat...   303   1e-82
AJ278068-1|CAB93526.2|  370|Drosophila melanogaster selenophosph...   120   2e-27
AE014134-1845|AAF52918.2|  370|Drosophila melanogaster CG5025-PA...   120   2e-27
BT011485-1|AAR99143.1|  250|Drosophila melanogaster LD21093p pro...    73   5e-13
AE014134-1846|AAN10746.2|  305|Drosophila melanogaster CG5025-PB...    73   5e-13
AF279253-1|AAF80118.1|  305|Drosophila melanogaster selenophosph...    71   2e-12
M37610-1|AAA28826.1|  152|Drosophila melanogaster protein ( D.me...    29   4.5  

>AY095058-1|AAM11386.1|  398|Drosophila melanogaster LD46437p
           protein.
          Length = 398

 Score =  307 bits (754), Expect = 8e-84
 Identities = 143/155 (92%), Positives = 152/155 (98%)
 Frame = -2

Query: 682 NRIKLVVSEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASH 503
           NRIKLVVSEEDVRKAYHRAM+SM+RLNR+AARLMHKYNAHG+TD+TGFGLLGHAQ LA+H
Sbjct: 244 NRIKLVVSEEDVRKAYHRAMNSMARLNRVAARLMHKYNAHGATDITGFGLLGHAQTLAAH 303

Query: 502 QKNEVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGLLICLPREQAAAYCKDIE 323
           QK +VSFVIHNLPVIAKMAAVAKACGNMFQLLQGH+ ETSGGLLICLPREQAAAYCKDIE
Sbjct: 304 QKKDVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHSAETSGGLLICLPREQAAAYCKDIE 363

Query: 322 KQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 218
           KQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 364 KQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AJ000672-1|CAA04229.1|  398|Drosophila melanogaster SelD protein
           protein.
          Length = 398

 Score =  307 bits (754), Expect = 8e-84
 Identities = 143/155 (92%), Positives = 152/155 (98%)
 Frame = -2

Query: 682 NRIKLVVSEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASH 503
           NRIKLVVSEEDVRKAYHRAM+SM+RLNR+AARLMHKYNAHG+TD+TGFGLLGHAQ LA+H
Sbjct: 244 NRIKLVVSEEDVRKAYHRAMNSMARLNRVAARLMHKYNAHGATDITGFGLLGHAQTLAAH 303

Query: 502 QKNEVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGLLICLPREQAAAYCKDIE 323
           QK +VSFVIHNLPVIAKMAAVAKACGNMFQLLQGH+ ETSGGLLICLPREQAAAYCKDIE
Sbjct: 304 QKKDVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHSAETSGGLLICLPREQAAAYCKDIE 363

Query: 322 KQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 218
           KQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 364 KQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AE013599-1864|AAM70998.1|  398|Drosophila melanogaster CG8553-PB,
           isoform B protein.
          Length = 398

 Score =  307 bits (754), Expect = 8e-84
 Identities = 143/155 (92%), Positives = 152/155 (98%)
 Frame = -2

Query: 682 NRIKLVVSEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASH 503
           NRIKLVVSEEDVRKAYHRAM+SM+RLNR+AARLMHKYNAHG+TD+TGFGLLGHAQ LA+H
Sbjct: 244 NRIKLVVSEEDVRKAYHRAMNSMARLNRVAARLMHKYNAHGATDITGFGLLGHAQTLAAH 303

Query: 502 QKNEVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGLLICLPREQAAAYCKDIE 323
           QK +VSFVIHNLPVIAKMAAVAKACGNMFQLLQGH+ ETSGGLLICLPREQAAAYCKDIE
Sbjct: 304 QKKDVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHSAETSGGLLICLPREQAAAYCKDIE 363

Query: 322 KQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 218
           KQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 364 KQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AE013599-1863|AAF58266.1|  398|Drosophila melanogaster CG8553-PA,
           isoform A protein.
          Length = 398

 Score =  307 bits (754), Expect = 8e-84
 Identities = 143/155 (92%), Positives = 152/155 (98%)
 Frame = -2

Query: 682 NRIKLVVSEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASH 503
           NRIKLVVSEEDVRKAYHRAM+SM+RLNR+AARLMHKYNAHG+TD+TGFGLLGHAQ LA+H
Sbjct: 244 NRIKLVVSEEDVRKAYHRAMNSMARLNRVAARLMHKYNAHGATDITGFGLLGHAQTLAAH 303

Query: 502 QKNEVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGLLICLPREQAAAYCKDIE 323
           QK +VSFVIHNLPVIAKMAAVAKACGNMFQLLQGH+ ETSGGLLICLPREQAAAYCKDIE
Sbjct: 304 QKKDVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHSAETSGGLLICLPREQAAAYCKDIE 363

Query: 322 KQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 218
           KQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 364 KQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>U91994-1|AAB88790.1|  398|Drosophila melanogaster selenophosphate
           synthetase protein.
          Length = 398

 Score =  303 bits (745), Expect = 1e-82
 Identities = 141/155 (90%), Positives = 152/155 (98%)
 Frame = -2

Query: 682 NRIKLVVSEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASH 503
           NRIKLVVSE++VRKAYHRAM+SM+RLNR+AARLMHKYNAHG+TD+TGFGLLGHAQ LA+H
Sbjct: 244 NRIKLVVSEKNVRKAYHRAMNSMARLNRVAARLMHKYNAHGATDITGFGLLGHAQTLAAH 303

Query: 502 QKNEVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGLLICLPREQAAAYCKDIE 323
           QK +VSFVIHNLPVIAKMAAVAKACGNMFQLLQGH+ ETSGGLLICLPREQAAAYCKDIE
Sbjct: 304 QKKDVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHSAETSGGLLICLPREQAAAYCKDIE 363

Query: 322 KQEGYQAWIIGIVEKGNRTARIIDKPRVIEVPAKD 218
           KQEGYQAWIIGIVEKGN+TARIIDKPRVIEVPAKD
Sbjct: 364 KQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD 398


>AJ278068-1|CAB93526.2|  370|Drosophila melanogaster selenophosphate
           synthetase 2 protein.
          Length = 370

 Score =  120 bits (289), Expect = 2e-27
 Identities = 61/138 (44%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
 Frame = -2

Query: 661 SEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASHQKNEVSF 482
           S+ D+++ +  A+ SM+ LN+ AA LMHKY AH +TD+TGFGLLGHA NLA  QK +V F
Sbjct: 222 SDADIKETFEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLF 281

Query: 481 VIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGLLICLPREQAAAYCKDIEK-QEGYQ 305
            I+ LP+I  +   +   G   +   G + ETSGGLLICLP + A  +C+D E+   G Q
Sbjct: 282 QINKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEATNGEQ 341

Query: 304 -AWIIGIVEKGNRTARII 254
            ++ IG V   N +  ++
Sbjct: 342 KSFQIGHVTAANESDAVL 359


>AE014134-1845|AAF52918.2|  370|Drosophila melanogaster CG5025-PA,
           isoform A protein.
          Length = 370

 Score =  120 bits (289), Expect = 2e-27
 Identities = 61/138 (44%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
 Frame = -2

Query: 661 SEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASHQKNEVSF 482
           S+ D+++ +  A+ SM+ LN+ AA LMHKY AH +TD+TGFGLLGHA NLA  QK +V F
Sbjct: 222 SDADIKETFEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLF 281

Query: 481 VIHNLPVIAKMAAVAKACGNMFQLLQGHAPETSGGLLICLPREQAAAYCKDIEK-QEGYQ 305
            I+ LP+I  +   +   G   +   G + ETSGGLLICLP + A  +C+D E+   G Q
Sbjct: 282 QINKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEATNGEQ 341

Query: 304 -AWIIGIVEKGNRTARII 254
            ++ IG V   N +  ++
Sbjct: 342 KSFQIGHVTAANESDAVL 359


>BT011485-1|AAR99143.1|  250|Drosophila melanogaster LD21093p
           protein.
          Length = 250

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 32/57 (56%), Positives = 43/57 (75%)
 Frame = -2

Query: 661 SEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASHQKNE 491
           S+ D+++ +  A+ SM+ LN+ AA LMHKY AH +TD+TGFGLLGHA NLA  QK +
Sbjct: 167 SDADIKETFEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEK 223


>AE014134-1846|AAN10746.2|  305|Drosophila melanogaster CG5025-PB,
           isoform B protein.
          Length = 305

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 32/57 (56%), Positives = 43/57 (75%)
 Frame = -2

Query: 661 SEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASHQKNE 491
           S+ D+++ +  A+ SM+ LN+ AA LMHKY AH +TD+TGFGLLGHA NLA  QK +
Sbjct: 222 SDADIKETFEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEK 278


>AF279253-1|AAF80118.1|  305|Drosophila melanogaster selenophosphate
           synthetase 2-likeprotein protein.
          Length = 305

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 31/57 (54%), Positives = 42/57 (73%)
 Frame = -2

Query: 661 SEEDVRKAYHRAMDSMSRLNRIAARLMHKYNAHGSTDVTGFGLLGHAQNLASHQKNE 491
           S+ D+++ +  A+ SM+ LN+ A  LMHKY AH +TD+TGFGLLGHA NLA  QK +
Sbjct: 222 SDADIKETFEIAVKSMTYLNKNAXLLMHKYQAHCATDITGFGLLGHANNLAQFQKEK 278


>M37610-1|AAA28826.1|  152|Drosophila melanogaster protein (
           D.melanogaster polytenegene, partial cds. ).
          Length = 152

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 452 DGSSSESLWEHVSIATRTRSRDIWWTSNLSATRTGC 345
           DG S +SL E +   T T      WT +    RTGC
Sbjct: 79  DGLSGQSLHEDLHTTTETXEPSEGWTPSGCCNRTGC 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,436,055
Number of Sequences: 53049
Number of extensions: 589853
Number of successful extensions: 1462
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)