Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f03f
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    29   0.034
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.034
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.034
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       25   0.55 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.9  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 29.1 bits (62), Expect = 0.034
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 247 DLKGRSCKVPQDVL-GKLVESLQQDY 321
           DLKGR+  VP D L G+ + S+ +DY
Sbjct: 87  DLKGRTTSVPYDALTGQCIYSISRDY 112


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 0.034
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 247 DLKGRSCKVPQDVL-GKLVESLQQDY 321
           DLKGR+  VP D L G+ + S+ +DY
Sbjct: 87  DLKGRTTSVPYDALTGQCIYSISRDY 112


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 0.034
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 247 DLKGRSCKVPQDVL-GKLVESLQQDY 321
           DLKGR+  VP D L G+ + S+ +DY
Sbjct: 87  DLKGRTTSVPYDALTGQCIYSISRDY 112


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 382 DCSVTPLRHGGLCLVQTTDF 441
           DCS  P R+ G C+ +  DF
Sbjct: 109 DCSPNPCRNNGSCVDRIADF 128



 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 382 DCSVTPLRHGGLCLVQTTDF 441
           DC V P  +GG C+ +   F
Sbjct: 71  DCKVNPCENGGTCVDKINAF 90


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 376 GLDCSVTPLRHGGLCLV 426
           G DC   P ++GG+C +
Sbjct: 377 GYDCDSNPCQNGGVCRI 393


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 620 NPRIIRGITTSRSFSVIFVETP 555
           NP +  G+  +R+F  +FV  P
Sbjct: 32  NPSLREGLKGARTFRCVFVLDP 53


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 307 LQQDYSQADQDQFMHVAIPRIGIGLD 384
           + QD++ +D D+   VA  R  IGL+
Sbjct: 179 IPQDFTASDLDEEHRVAYWREDIGLN 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,551
Number of Sequences: 336
Number of extensions: 3356
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)