Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f02r
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.30 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.40 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   2.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   3.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   4.9  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   8.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    20   8.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   8.5  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 291 CPLPSKVYGCSPKCKEDYECTHGK 220
           C L SKV G    C   +EC +G+
Sbjct: 29  CKLKSKVVGDETYCDRYWECVNGQ 52


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 306 EAAGTCPLPSKVYGCSPKCKEDYECTHGKV 217
           EA   CP     +  + +C + YEC  G++
Sbjct: 34  EATDQCPEKYGFFADAEQCDKYYECNDGQI 63


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = -1

Query: 287 LFLRKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPAE 123
           L +  C V A N+R+T  +            P R +     +E+ G+ A    A+
Sbjct: 227 LIIMGCDVVASNSRKTAEMCYKLQGFYPEEAPQRKELLRFASESRGSVAKFTAAD 281


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 210 NSRPCRVYIRSPPC 251
           N RP  +Y   PPC
Sbjct: 353 NERPWSLYCGEPPC 366


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 144 WSSRCLRRKQPALNTTWRC 200
           W S  L       NTTWRC
Sbjct: 145 WISFFLNFMLHCNNTTWRC 163


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 360 SMTFLLGVFALVTFVFYAEAAGTCPLPSKVYG 265
           +M+ +L +  ++T+ F+A  AG     S +YG
Sbjct: 189 AMSNVLDIINVMTYDFHAMWAGFTAENSPLYG 220


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 252 CKEDYECTHGK 220
           C + Y C HGK
Sbjct: 488 CDKYYRCVHGK 498


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 174 AAYGGGTGSSSKH 136
           AA+GGG   S+KH
Sbjct: 321 AAWGGGALVSAKH 333


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 309 AEAAGTCPLPSKVYGCSPKCKE 244
           A+  G C  P  V GC    K+
Sbjct: 205 ADGTGNCEDPEDVPGCEDYYKD 226


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 329 WLPLSSTPKPLARALFLRKCTVAALNARRTT 237
           WL LSST +  A   F +  T      R+ T
Sbjct: 498 WLVLSSTVRAYASRAFKKIVTYKGGKYRKVT 528


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,524
Number of Sequences: 336
Number of extensions: 1868
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)