Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f02r
         (419 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kina...    35   0.097
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.        32   0.68 
BC005134-1|AAH05134.1|  222|Homo sapiens RPL14 protein protein.        32   0.68 
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr...    32   0.68 
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr...    32   0.68 
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc...    32   0.68 
AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens ...    31   1.6  

>L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kinase
            protein.
          Length = 1036

 Score = 35.1 bits (77), Expect = 0.097
 Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -1

Query: 326  LPLSSTPKPLARALFLRKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPG- 150
            LP  STP P A    +R    AAL+ +   N  T  S    R  P R  +RL     PG 
Sbjct: 892  LPPPSTPAPAAPTATVRPMPQAALDPK--ANFSTNNSNPGARPPPPRATARLPQRGCPGD 949

Query: 149  APANTQPAERAFTAKTSSVTLTKYASVIQ 63
             P   +PA++   A    VT  +  + +Q
Sbjct: 950  GPEAGRPADKIQMAMVHGVTTEECQAALQ 978


>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
          Length = 1224

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 278 RKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPAERAFTAKTS 99
           R CT +A     T+  HT+ S      TPS   SR  T  +   P    PA  +    TS
Sbjct: 750 RGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTS 809

Query: 98  SVTLT 84
           + + T
Sbjct: 810 ASSTT 814


>BC005134-1|AAH05134.1|  222|Homo sapiens RPL14 protein protein.
          Length = 222

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -1

Query: 305 KPLARALFLRKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPA 126
           K L +A  L+     A   + T     A +A    A  ++V ++ +TA +  APA   PA
Sbjct: 128 KKLQKAALLKSSPKKAPGTKGTAAAAAAAAAAAAAAAAAKVPAKKITAASKKAPAQKVPA 187

Query: 125 ERAFTAKTS 99
           ++A   K +
Sbjct: 188 QKATGQKAA 196


>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
            protein.
          Length = 4262

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 278  RKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPAERAFTAKTS 99
            R CT +A     T+  HT+ S      TPS   SR  T  +   P    PA  +    TS
Sbjct: 4019 RGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTS 4078

Query: 98   SVTLT 84
            + + T
Sbjct: 4079 ASSTT 4083


>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
            protein.
          Length = 4493

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 278  RKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPAERAFTAKTS 99
            R CT +A     T+  HT+ S      TPS   SR  T  +   P    PA  +    TS
Sbjct: 4019 RGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTS 4078

Query: 98   SVTLT 84
            + + T
Sbjct: 4079 ASSTT 4083


>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
           MUC17 protein.
          Length = 1029

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 278 RKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPAERAFTAKTS 99
           R CT +A     T+  HT+ S      TPS   SR  T  +   P    PA  +    TS
Sbjct: 555 RGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTS 614

Query: 98  SVTLT 84
           + + T
Sbjct: 615 ASSTT 619


>AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens cDNA
            FLJ16772 fis, clone BRAWH3043827, highly  similar to Homo
            sapiens activated p21cdc42Hs kinase (ACK1). ).
          Length = 1086

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 326  LPLSSTPKPLARALFLRKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPG- 150
            LP  STP P A    +R    AAL+ +   N  T  S    R  P R  +RL     PG 
Sbjct: 972  LPPPSTPAPAAPTATVRPMPQAALDPK--ANFSTNNSNPGARPPPPRATARLPQRGCPGD 1029

Query: 149  APANTQPAER 120
             P   +PA++
Sbjct: 1030 GPEAGRPADK 1039


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,118,514
Number of Sequences: 237096
Number of extensions: 1127297
Number of successful extensions: 3272
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3259
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)