Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12f02f
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113384-1|AAM29389.1|  113|Drosophila melanogaster RE05231p pro...    72   4e-13
AE013599-1905|AAM68554.1|  113|Drosophila melanogaster CG30197-P...    72   4e-13
AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p pro...    29   3.3  
AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA...    29   3.3  
U11441-1|AAA53242.1|  570|Drosophila melanogaster SAX protein.         29   4.4  
U05209-1|AAA18208.1|  570|Drosophila melanogaster serine-threoni...    29   4.4  
L33790-1|AAA61946.1|  570|Drosophila melanogaster receptor prote...    29   4.4  
L33476-1|AAA28878.1|  570|Drosophila melanogaster saxophone prot...    29   4.4  
AY058363-1|AAL13592.1|  535|Drosophila melanogaster GH13369p pro...    29   4.4  
AE013599-506|AAM68863.1|  535|Drosophila melanogaster CG1891-PB,...    29   4.4  
AE013599-505|AAF59189.1|  570|Drosophila melanogaster CG1891-PA,...    29   4.4  
AF209858-1|AAG43498.1|  321|Drosophila melanogaster LD14 protein.      28   5.8  
AE014298-1281|AAF46447.2|  321|Drosophila melanogaster CG12664-P...    28   5.8  
AB065095-1|BAB83666.1|  321|Drosophila melanogaster transmembran...    28   5.8  

>AY113384-1|AAM29389.1|  113|Drosophila melanogaster RE05231p
           protein.
          Length = 113

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
 Frame = +3

Query: 51  KMGSMTFLLGVFALVTFVFYAEAAGTCPLPSKVYGCSPKCKEDYECTH-GKVXXXXXXXX 227
           K+G ++ L+    +  F     AAG CP  +KV  C+PKC  D EC+  G          
Sbjct: 3   KLGFLSLLIAACVVAAF-----AAGDCPSSTKVQNCTPKCLHDSECSAIGGKCCPNLCNG 57

Query: 228 XXXXEPAAYGGGTGSSSKHAT---GGTGVYCENVKCNSYEICKRDPMTKRMKCSRA 386
               +P   G      S   +   G TG YC NVKC S+E C+ D  TKR KC R+
Sbjct: 58  RSCAQPNVLGNSGADKSPFGSKNSGATGSYCGNVKCGSFEKCEMDRSTKRPKCVRS 113


>AE013599-1905|AAM68554.1|  113|Drosophila melanogaster CG30197-PA
           protein.
          Length = 113

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
 Frame = +3

Query: 51  KMGSMTFLLGVFALVTFVFYAEAAGTCPLPSKVYGCSPKCKEDYECTH-GKVXXXXXXXX 227
           K+G ++ L+    +  F     AAG CP  +KV  C+PKC  D EC+  G          
Sbjct: 3   KLGFLSLLIAACVVAAF-----AAGDCPSSTKVQNCTPKCLHDSECSAIGGKCCPNLCNG 57

Query: 228 XXXXEPAAYGGGTGSSSKHAT---GGTGVYCENVKCNSYEICKRDPMTKRMKCSRA 386
               +P   G      S   +   G TG YC NVKC S+E C+ D  TKR KC R+
Sbjct: 58  RSCAQPNVLGNSGADKSPFGSKNSGATGSYCGNVKCGSFEKCEMDRSTKRPKCVRS 113


>AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p
           protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 356 WITLAYFVRVTLDVFAVNARSAGCVFAGAPGASAVS 249
           W+  + ++R  L  FAV++ SAG   A A G + V+
Sbjct: 17  WLLASIWIRTCLAQFAVSSSSAGGAVASAGGVTVVA 52


>AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA
           protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 356 WITLAYFVRVTLDVFAVNARSAGCVFAGAPGASAVS 249
           W+  + ++R  L  FAV++ SAG   A A G + V+
Sbjct: 17  WLLASIWIRTCLAQFAVSSSSAGGAVASAGGVTVVA 52


>U11441-1|AAA53242.1|  570|Drosophila melanogaster SAX protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KVYGCSPKCKEDYECTH 194
           K Y C P C++ YE TH
Sbjct: 66  KCYSCEPPCRDPYEFTH 82


>U05209-1|AAA18208.1|  570|Drosophila melanogaster serine-threonine
           kinase receptor protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KVYGCSPKCKEDYECTH 194
           K Y C P C++ YE TH
Sbjct: 66  KCYSCEPPCRDPYEFTH 82


>L33790-1|AAA61946.1|  570|Drosophila melanogaster receptor protein
           serine/threoninekinase protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KVYGCSPKCKEDYECTH 194
           K Y C P C++ YE TH
Sbjct: 66  KCYSCEPPCRDPYEFTH 82


>L33476-1|AAA28878.1|  570|Drosophila melanogaster saxophone protein
           protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KVYGCSPKCKEDYECTH 194
           K Y C P C++ YE TH
Sbjct: 66  KCYSCEPPCRDPYEFTH 82


>AY058363-1|AAL13592.1|  535|Drosophila melanogaster GH13369p
           protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KVYGCSPKCKEDYECTH 194
           K Y C P C++ YE TH
Sbjct: 31  KCYSCEPPCRDPYEFTH 47


>AE013599-506|AAM68863.1|  535|Drosophila melanogaster CG1891-PB,
           isoform B protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KVYGCSPKCKEDYECTH 194
           K Y C P C++ YE TH
Sbjct: 31  KCYSCEPPCRDPYEFTH 47


>AE013599-505|AAF59189.1|  570|Drosophila melanogaster CG1891-PA,
           isoform A protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KVYGCSPKCKEDYECTH 194
           K Y C P C++ YE TH
Sbjct: 66  KCYSCEPPCRDPYEFTH 82


>AF209858-1|AAG43498.1|  321|Drosophila melanogaster LD14 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 130 ALFLRKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPA 294
           +L L  C +AAL+  +      ++S  L  +    V S L +A +PGA A+   A
Sbjct: 4   SLVLMACALAALSVAQGAGSARSKSLPLSLSLSVSVSSSLASASSPGAAADPTAA 58


>AE014298-1281|AAF46447.2|  321|Drosophila melanogaster CG12664-PB
           protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 130 ALFLRKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPA 294
           +L L  C +AAL+  +      ++S  L  +    V S L +A +PGA A+   A
Sbjct: 4   SLVLMACALAALSVAQGAGSARSKSLPLSLSLSVSVSSSLASASSPGAAADPTAA 58


>AB065095-1|BAB83666.1|  321|Drosophila melanogaster transmembrane
           protein FEND protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 130 ALFLRKCTVAALNARRTTNVHTARSAVLIRATPSRVQSRLLTAEAPGAPANTQPA 294
           +L L  C +AAL+  +      ++S  L  +    V S L +A +PGA A+   A
Sbjct: 4   SLVLMACALAALSVAQGAGSARSKSLPLSLSLSVSVSSSLASASSPGAAADPTAA 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,973,194
Number of Sequences: 53049
Number of extensions: 425535
Number of successful extensions: 1717
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)