Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e24r
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...   217   1e-58
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    26   0.28 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.64 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.64 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.6  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   3.4  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   4.5  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   4.5  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   4.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score =  217 bits (529), Expect = 1e-58
 Identities = 88/139 (63%), Positives = 108/139 (77%)
 Frame = -2

Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
           P   KM+GN IC+QIPW KN   L  WA G+TG+P++DAIM QL++EGWIHHLARH VAC
Sbjct: 317 PNFDKMIGNPICVQIPWDKNAEALAKWANGQTGFPWIDAIMTQLREEGWIHHLARHAVAC 376

Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
           FLTRGDLW+SWEEG K+FE+ LLD DWS+NAG WMWLS S+FF ++F  Y P+ FG+K D
Sbjct: 377 FLTRGDLWLSWEEGMKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPIKFGRKAD 436

Query: 357 KEGVYIKKYVPELKKYPRE 301
             G YI+KY+P LK  P +
Sbjct: 437 PNGDYIRKYLPVLKNMPSQ 455



 Score = 51.6 bits (118), Expect = 6e-09
 Identities = 21/45 (46%), Positives = 29/45 (64%)
 Frame = -3

Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
           +EPW AP+ +QR A CIIG+ Y   +VNH    + NIQ+M   Y+
Sbjct: 458 HEPWTAPEQVQRAAKCIIGKDYSLPMVNHAAASRVNIQRMKQVYQ 502


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 369 QKTDKEGVYIKKYVPELK 316
           +K DKEG Y KKY  E+K
Sbjct: 106 EKYDKEGEYRKKYEAEIK 123


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 117 LYCFLFPIQFICSCHFLYILFMYCI-MVDYSFRIVFSYNT 233
           LY  L  IQF  S HF ++    C+    Y F + + Y T
Sbjct: 58  LYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTT 97


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 117 LYCFLFPIQFICSCHFLYILFMYCI-MVDYSFRIVFSYNT 233
           LY  L  IQF  S HF ++    C+    Y F + + Y T
Sbjct: 14  LYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTT 53


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 147 ICSCHF-LYILFMYCIMVDYSFRIVFS 224
           +C  +F L++LF+ CI   YS  I+F+
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYSAFIIFT 223


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = -2

Query: 585 KQEGWIHHLARHMVACFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAG 442
           K  GW      H    +  +G+ W+ +E+     E   +  DW  + G
Sbjct: 319 KDSGWTKKWDEHGKVPYAYKGNQWVGYEDP----ESVQIKMDWIKSKG 362


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 366 KTDKEGVYIKKYVPELKK 313
           K DK+GVY +KY   ++K
Sbjct: 107 KYDKDGVYRQKYKDVIEK 124


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 366 KTDKEGVYIKKYVPELK 316
           K D  G+Y  KY  ELK
Sbjct: 105 KYDPTGIYKNKYADELK 121


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 366 KTDKEGVYIKKYVPELK 316
           K D  G+Y  KY  ELK
Sbjct: 105 KYDPTGIYKNKYADELK 121


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 289 NHKNMNHGKHLSQFKEMQDVL*ENTILNE*STMIQYIKR 173
           NHKN+  G  + +  +   VL ++ I++E  T++  + R
Sbjct: 14  NHKNVQVGDLVQKIAQKLQVLFQDQIVDEMVTVLGDLHR 52


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 449 MLVIGCGCQ 423
           M+V+GCGC+
Sbjct: 364 MVVVGCGCR 372


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 551 CLAK*WIQPSCFSCLMIASTNG*PVLPSA 637
           CL K W  PS    L +  T   P + SA
Sbjct: 144 CLYKLWKMPSLSEFLSLFGTETCPAIGSA 172


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 551 CLAK*WIQPSCFSCLMIASTNG*PVLPSA 637
           CL K W  PS    L +  T   P + SA
Sbjct: 144 CLYKLWKMPSLSEFLSLFGTETCPAIGSA 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,622
Number of Sequences: 336
Number of extensions: 3491
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)