Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e24r
(739 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 216 5e-58
DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1 pro... 163 4e-42
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 26 1.1
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 3.2
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 5.6
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 24 5.6
AY193730-1|AAO62003.1| 441|Anopheles gambiae cytochrome P450 CY... 23 7.4
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 9.8
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 216 bits (528), Expect = 5e-58
Identities = 88/137 (64%), Positives = 107/137 (78%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P KM GN IC+QIPW +N L WA G+TG+P++DAIM QL++EGWIHHLARH VAC
Sbjct: 304 PTFDKMAGNPICVQIPWDRNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVAC 363
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG K+FE+ LLD DWS+NAG WMWLS S+FF ++F Y PV FG+K D
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPVKFGRKAD 423
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P LK +P
Sbjct: 424 PNGDYIRRYLPVLKNFP 440
Score = 48.8 bits (111), Expect = 2e-07
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
+EPW A +S+QR A C+IG+ YP +VNH + N++++ Y+
Sbjct: 445 HEPWNASESVQRAAKCLIGKDYPLPMVNHAIASRANMERIKQVYQ 489
>DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1
protein.
Length = 545
Score = 163 bits (397), Expect = 4e-42
Identities = 72/142 (50%), Positives = 95/142 (66%), Gaps = 3/142 (2%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 541
P +M N IC+ IPW K D L W EG+TG+P +DA MRQL EGW+HH+ R++ A
Sbjct: 323 PHYGEMERNPICLNIPWYKPEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITA 382
Query: 540 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF--FYKYFRVYSPVAFGQ 367
FLTRG LW+SWEEG + F YLLD DWS+ AGNWMW+S+SAF + P+A +
Sbjct: 383 TFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSKCTCPIALAR 442
Query: 366 KTDKEGVYIKKYVPELKKYPRE 301
+ D +G Y+K+Y+PEL YP +
Sbjct: 443 RLDPKGDYVKRYLPELANYPAQ 464
Score = 42.3 bits (95), Expect = 2e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMAT 153
+EPWKA + Q GC+IGE YP +V+ + K N MA+
Sbjct: 467 HEPWKASREQQIEYGCVIGEKYPAPMVDLAIVSKRNAHTMAS 508
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 108 SWSLYCFLFPIQFICSCHFLYILFMYCIMVDYSFRIVFSYN 230
S+ +YCF+ P CS L+I F++ ++ + ++FS++
Sbjct: 32 SFLIYCFVSPSCLECSSVPLFINFIFMFLLHF---VLFSFS 69
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 24.6 bits (51), Expect = 3.2
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 524 PRVKKQATMCL-AK*WIQPSCFSC 592
PR+ K+AT+C+ A WI + SC
Sbjct: 188 PRMGKKATLCVAASIWIVGTIISC 211
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -3
Query: 224 GEHYPKRIVNHDTIHKENI-QKMATAYKL 141
G H+ KR+++ DTI + Q ++ Y+L
Sbjct: 1079 GFHWNKRLLDEDTIRLRKVNQNLSADYRL 1107
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -1
Query: 460 LVIECW*LDVVVSFCILLQIFQSL*SSGIWSE 365
++I W L V+S C +L + WSE
Sbjct: 1 MLIVAWLLSAVLSLCFVLCVIHIRKKYSFWSE 32
>AY193730-1|AAO62003.1| 441|Anopheles gambiae cytochrome P450
CYPm3r10 protein.
Length = 441
Score = 23.4 bits (48), Expect = 7.4
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = +2
Query: 242 FFELTEVLSMVHIFMVIFLHSRGYFFNSGTYF 337
FF+ +++ + + +F+ YF + GTY+
Sbjct: 18 FFKPVALITDLELLKCVFVKDFQYFHDRGTYY 49
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 322 IKEVSTRMKKYNHKNMNHGKHLSQFKEMQDVL 227
+++ + +KKYNH N F E ++ L
Sbjct: 968 LEKANQHLKKYNHVNKKALDQFLSFSEQKEKL 999
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,685
Number of Sequences: 2352
Number of extensions: 14414
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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