Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e24r
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like cryptoc... 221 3e-57
D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein. 221 3e-57
D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein. 221 3e-57
BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1 (photoly... 221 3e-57
EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like cryptoc... 215 1e-55
BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2 (photoly... 215 1e-55
AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein. 215 1e-55
BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein. 213 4e-55
AK098615-1|BAC05354.1| 194|Homo sapiens protein ( Homo sapiens ... 50 9e-06
BC035757-1|AAH35757.2| 440|Homo sapiens secretin receptor protein. 30 10.0
>EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like
cryptochrome 1 protein.
Length = 586
Score = 221 bits (539), Expect = 3e-57
Identities = 90/137 (65%), Positives = 110/137 (80%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P KM GN IC+QIPW KN L WAEG+TG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG K+FE+ LLD DWS+NAG+WMWLS S+FF ++F Y PV FG++TD
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P L+ +P
Sbjct: 424 PNGDYIRRYLPVLRGFP 440
Score = 54.0 bits (124), Expect = 5e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
Y+PW AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 445 YDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein.
Length = 586
Score = 221 bits (539), Expect = 3e-57
Identities = 90/137 (65%), Positives = 110/137 (80%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P KM GN IC+QIPW KN L WAEG+TG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG K+FE+ LLD DWS+NAG+WMWLS S+FF ++F Y PV FG++TD
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P L+ +P
Sbjct: 424 PNGDYIRRYLPVLRGFP 440
Score = 54.0 bits (124), Expect = 5e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
Y+PW AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 445 YDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein.
Length = 586
Score = 221 bits (539), Expect = 3e-57
Identities = 90/137 (65%), Positives = 110/137 (80%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P KM GN IC+QIPW KN L WAEG+TG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG K+FE+ LLD DWS+NAG+WMWLS S+FF ++F Y PV FG++TD
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P L+ +P
Sbjct: 424 PNGDYIRRYLPVLRGFP 440
Score = 54.0 bits (124), Expect = 5e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
Y+PW AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 445 YDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1
(photolyase-like) protein.
Length = 586
Score = 221 bits (539), Expect = 3e-57
Identities = 90/137 (65%), Positives = 110/137 (80%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P KM GN IC+QIPW KN L WAEG+TG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 304 PRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVAC 363
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG K+FE+ LLD DWS+NAG+WMWLS S+FF ++F Y PV FG++TD
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P L+ +P
Sbjct: 424 PNGDYIRRYLPVLRGFP 440
Score = 54.0 bits (124), Expect = 5e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
Y+PW AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 445 YDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 489
>EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like
cryptochrome 2 protein.
Length = 593
Score = 215 bits (525), Expect = 1e-55
Identities = 87/137 (63%), Positives = 110/137 (80%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M GN ICIQIPW +N L WAEGKTG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 323 PRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVAC 382
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLW+SWE G ++F++ LLD D+S+NAG+WMWLS SAFF ++F Y PV FG++TD
Sbjct: 383 FLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 442
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P+LK +P
Sbjct: 443 PSGDYIRRYLPKLKAFP 459
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
YEPW AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 464 YEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 508
>BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2
(photolyase-like) protein.
Length = 593
Score = 215 bits (525), Expect = 1e-55
Identities = 87/137 (63%), Positives = 110/137 (80%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M GN ICIQIPW +N L WAEGKTG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 323 PRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVAC 382
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLW+SWE G ++F++ LLD D+S+NAG+WMWLS SAFF ++F Y PV FG++TD
Sbjct: 383 FLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 442
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P+LK +P
Sbjct: 443 PSGDYIRRYLPKLKAFP 459
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
YEPW AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 464 YEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 508
>AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein.
Length = 589
Score = 215 bits (525), Expect = 1e-55
Identities = 87/137 (63%), Positives = 110/137 (80%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M GN ICIQIPW +N L WAEGKTG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 319 PRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVAC 378
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLW+SWE G ++F++ LLD D+S+NAG+WMWLS SAFF ++F Y PV FG++TD
Sbjct: 379 FLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 438
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P+LK +P
Sbjct: 439 PSGDYIRRYLPKLKAFP 455
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
YEPW AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 460 YEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 504
>BC035161-1|AAH35161.1| 461|Homo sapiens CRY2 protein protein.
Length = 461
Score = 213 bits (521), Expect = 4e-55
Identities = 86/137 (62%), Positives = 109/137 (79%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M GN ICIQIPW +N L WAEGKTG+P++DAIM QL+QEGWIHHLARH VAC
Sbjct: 191 PRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVAC 250
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLW+SWE G ++F++ LLD D+S+NAG+WMWLS AFF ++F Y PV FG++TD
Sbjct: 251 FLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCGAFFQQFFHCYCPVGFGRRTD 310
Query: 357 KEGVYIKKYVPELKKYP 307
G YI++Y+P+LK +P
Sbjct: 311 PSGDYIRRYLPKLKAFP 327
Score = 57.2 bits (132), Expect = 6e-08
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
YEPW AP+SIQ+ A CIIG YP+ IVNH + NI++M Y+
Sbjct: 332 YEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQ 376
>AK098615-1|BAC05354.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ25749 fis, clone TST06111, highly similar to
Homo sapiens mRNA for photolyase. ).
Length = 194
Score = 50.0 bits (114), Expect = 9e-06
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYK 144
Y+ W AP+ IQ+ A C+IG +YPK +VNH + NI++M Y+
Sbjct: 53 YDLWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQ 97
Score = 46.4 bits (105), Expect = 1e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -2
Query: 414 FFYKYFRVYSPVAFGQKTDKEGVYIKKYVPELKKYP 307
FF +F Y PV FG++TD G YI++Y+P L+ +P
Sbjct: 13 FFNSFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFP 48
>BC035757-1|AAH35757.2| 440|Homo sapiens secretin receptor protein.
Length = 440
Score = 29.9 bits (64), Expect = 10.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 156 CHFLYILFMYCIMVDYSFRIV 218
C + +LF YCIM +YS+ +V
Sbjct: 215 CKLIMVLFQYCIMANYSWLLV 235
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,493,812
Number of Sequences: 237096
Number of extensions: 1891832
Number of successful extensions: 3332
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3332
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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