Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e24r
(739 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase pro... 244 1e-64
AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p pro... 244 1e-64
AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB... 244 1e-64
AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA... 244 1e-64
AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light p... 164 1e-40
AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p pro... 164 1e-40
AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome... 164 1e-40
AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA... 164 1e-40
AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light r... 164 1e-40
AY455866-1|AAR19767.1| 583|Drosophila melanogaster putative cho... 33 0.31
AY102683-1|AAM27512.1| 545|Drosophila melanogaster LD23890p pro... 33 0.31
AE014134-485|AAN10390.1| 184|Drosophila melanogaster CG3119-PB,... 33 0.31
AE013599-3906|AAS64770.1| 545|Drosophila melanogaster CG3522-PB... 33 0.31
AE013599-3905|AAF47232.2| 583|Drosophila melanogaster CG3522-PA... 33 0.31
BT024957-1|ABE01187.1| 355|Drosophila melanogaster IP15602p pro... 33 0.41
AE014134-484|AAF51199.2| 355|Drosophila melanogaster CG3119-PA,... 33 0.41
AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p pro... 31 1.2
AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeran... 31 1.2
AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA... 31 1.2
>D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase
protein.
Length = 540
Score = 244 bits (597), Expect = 1e-64
Identities = 101/137 (73%), Positives = 118/137 (86%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M+GN C+QIPW ++ L+AW G+TGYPF+DAIMRQL+QEGWIHHLARH VAC
Sbjct: 314 PNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVAC 373
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG ++FE LLD DW+LNAGNWMWLSASAFF++YFRVYSPVAFG+KTD
Sbjct: 374 FLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTD 433
Query: 357 KEGVYIKKYVPELKKYP 307
+G YI+KYVPEL KYP
Sbjct: 434 PQGHYIRKYVPELSKYP 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYKLNREKKAVKRPRS*F 99
YEPWKA QR GC++G YP RIV H+ +HKENI++M AYK+NRE + K S F
Sbjct: 455 YEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVRTGKEEESSF 514
>AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p
protein.
Length = 540
Score = 244 bits (597), Expect = 1e-64
Identities = 101/137 (73%), Positives = 118/137 (86%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M+GN C+QIPW ++ L+AW G+TGYPF+DAIMRQL+QEGWIHHLARH VAC
Sbjct: 314 PNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVAC 373
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG ++FE LLD DW+LNAGNWMWLSASAFF++YFRVYSPVAFG+KTD
Sbjct: 374 FLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTD 433
Query: 357 KEGVYIKKYVPELKKYP 307
+G YI+KYVPEL KYP
Sbjct: 434 PQGHYIRKYVPELSKYP 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYKLNREKKAVKRPRS*F 99
YEPWKA QR GC++G YP RIV H+ +HKENI++M AYK+NRE + K S F
Sbjct: 455 YEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVRTGKEEESSF 514
>AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB,
isoform B protein.
Length = 540
Score = 244 bits (597), Expect = 1e-64
Identities = 101/137 (73%), Positives = 118/137 (86%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M+GN C+QIPW ++ L+AW G+TGYPF+DAIMRQL+QEGWIHHLARH VAC
Sbjct: 314 PNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVAC 373
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG ++FE LLD DW+LNAGNWMWLSASAFF++YFRVYSPVAFG+KTD
Sbjct: 374 FLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTD 433
Query: 357 KEGVYIKKYVPELKKYP 307
+G YI+KYVPEL KYP
Sbjct: 434 PQGHYIRKYVPELSKYP 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYKLNREKKAVKRPRS*F 99
YEPWKA QR GC++G YP RIV H+ +HKENI++M AYK+NRE + K S F
Sbjct: 455 YEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVRTGKEEESSF 514
>AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA,
isoform A protein.
Length = 540
Score = 244 bits (597), Expect = 1e-64
Identities = 101/137 (73%), Positives = 118/137 (86%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVAC 538
P +M+GN C+QIPW ++ L+AW G+TGYPF+DAIMRQL+QEGWIHHLARH VAC
Sbjct: 314 PNFDRMLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVAC 373
Query: 537 FLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAFFYKYFRVYSPVAFGQKTD 358
FLTRGDLWISWEEG ++FE LLD DW+LNAGNWMWLSASAFF++YFRVYSPVAFG+KTD
Sbjct: 374 FLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTD 433
Query: 357 KEGVYIKKYVPELKKYP 307
+G YI+KYVPEL KYP
Sbjct: 434 PQGHYIRKYVPELSKYP 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKMATAYKLNREKKAVKRPRS*F 99
YEPWKA QR GC++G YP RIV H+ +HKENI++M AYK+NRE + K S F
Sbjct: 455 YEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVRTGKEEESSF 514
>AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light
photoreceptor protein.
Length = 542
Score = 164 bits (399), Expect = 1e-40
Identities = 75/142 (52%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 541
P +M GN IC+ IPW K N+ L++W G+TG+P +D MRQL EGW+HH R+ VA
Sbjct: 326 PNYDRMEGNEICLSIPWAKPNEDLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVA 385
Query: 540 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF--FYKYFRVYSPVAFGQ 367
FLTRG LW SWE G + F YLLD DWS+ AGNWMW+S+SAF V PVA +
Sbjct: 386 TFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAK 445
Query: 366 KTDKEGVYIKKYVPELKKYPRE 301
+ D +G YIK+YVPEL P+E
Sbjct: 446 RLDPDGTYIKQYVPELMNVPKE 467
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKM 159
+EPW+ Q C+IG HYP+RI++ K N+ M
Sbjct: 470 HEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAM 509
>AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p
protein.
Length = 542
Score = 164 bits (398), Expect = 1e-40
Identities = 75/142 (52%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 541
P +M GN IC+ IPW K N+ L++W G+TG+P +D MRQL EGW+HH R+ VA
Sbjct: 326 PNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVA 385
Query: 540 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF--FYKYFRVYSPVAFGQ 367
FLTRG LW SWE G + F YLLD DWS+ AGNWMW+S+SAF V PVA +
Sbjct: 386 TFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAK 445
Query: 366 KTDKEGVYIKKYVPELKKYPRE 301
+ D +G YIK+YVPEL P+E
Sbjct: 446 RLDPDGTYIKQYVPELMNVPKE 467
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKM 159
+EPW+ Q C+IG HYP+RI++ K N+ M
Sbjct: 470 HEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAM 509
>AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome
protein.
Length = 542
Score = 164 bits (398), Expect = 1e-40
Identities = 75/142 (52%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 541
P +M GN IC+ IPW K N+ L++W G+TG+P +D MRQL EGW+HH R+ VA
Sbjct: 326 PNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVA 385
Query: 540 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF--FYKYFRVYSPVAFGQ 367
FLTRG LW SWE G + F YLLD DWS+ AGNWMW+S+SAF V PVA +
Sbjct: 386 TFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAK 445
Query: 366 KTDKEGVYIKKYVPELKKYPRE 301
+ D +G YIK+YVPEL P+E
Sbjct: 446 RLDPDGTYIKQYVPELMNVPKE 467
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKM 159
+EPW+ Q C+IG HYP+RI++ K N+ M
Sbjct: 470 HEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAM 509
>AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA
protein.
Length = 542
Score = 164 bits (398), Expect = 1e-40
Identities = 75/142 (52%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 541
P +M GN IC+ IPW K N+ L++W G+TG+P +D MRQL EGW+HH R+ VA
Sbjct: 326 PNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVA 385
Query: 540 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF--FYKYFRVYSPVAFGQ 367
FLTRG LW SWE G + F YLLD DWS+ AGNWMW+S+SAF V PVA +
Sbjct: 386 TFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAK 445
Query: 366 KTDKEGVYIKKYVPELKKYPRE 301
+ D +G YIK+YVPEL P+E
Sbjct: 446 RLDPDGTYIKQYVPELMNVPKE 467
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKM 159
+EPW+ Q C+IG HYP+RI++ K N+ M
Sbjct: 470 HEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAM 509
>AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light
receptor protein.
Length = 542
Score = 164 bits (398), Expect = 1e-40
Identities = 75/142 (52%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Frame = -2
Query: 717 PILXKMVGNAICIQIPWTK-NDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLARHMVA 541
P +M GN IC+ IPW K N+ L++W G+TG+P +D MRQL EGW+HH R+ VA
Sbjct: 326 PNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVA 385
Query: 540 CFLTRGDLWISWEEGAKIFEDYLLDYDWSLNAGNWMWLSASAF--FYKYFRVYSPVAFGQ 367
FLTRG LW SWE G + F YLLD DWS+ AGNWMW+S+SAF V PVA +
Sbjct: 386 TFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAK 445
Query: 366 KTDKEGVYIKKYVPELKKYPRE 301
+ D +G YIK+YVPEL P+E
Sbjct: 446 RLDPDGTYIKQYVPELMNVPKE 467
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 278 YEPWKAPQSIQRNAGCIIGEHYPKRIVNHDTIHKENIQKM 159
+EPW+ Q C+IG HYP+RI++ K N+ M
Sbjct: 470 HEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAM 509
>AY455866-1|AAR19767.1| 583|Drosophila melanogaster putative
cholesterol transporter protein.
Length = 583
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 93 HTKLRSWSLYCFLFPIQFICSCHFLYILFMYCIM-VDYSFRIVFSYNTSCISL 248
H ++ +++Y LF + + C FL ++F Y I+ +++ I S + SC+ L
Sbjct: 94 HKQIVEYTIYKSLFDVVAVAICRFLVLIFFYAILYINHWSIIALSTSGSCLFL 146
>AY102683-1|AAM27512.1| 545|Drosophila melanogaster LD23890p
protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 93 HTKLRSWSLYCFLFPIQFICSCHFLYILFMYCIM-VDYSFRIVFSYNTSCISL 248
H ++ +++Y LF + + C FL ++F Y I+ +++ I S + SC+ L
Sbjct: 94 HKQIVEYTIYKSLFDVVAVAICRFLVLIFFYAILYINHWSIIALSTSGSCLFL 146
>AE014134-485|AAN10390.1| 184|Drosophila melanogaster CG3119-PB,
isoform B protein.
Length = 184
Score = 33.5 bits (73), Expect = 0.31
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 522 DLWISWEEGAK-IFEDYLLDYDWSLNAGN--WMWLSASAFFYKYFRVYSPVAFGQKTDKE 352
DLW EG + ++E Y DYDW L A + ++ + + F +PV FG K +
Sbjct: 118 DLWNKTREGFRHVWEHYAGDYDWFLKADDDTYVVMENLQHLLRGFDPNTPVFFGYKMSRY 177
Query: 351 GVYI 340
V +
Sbjct: 178 NVLL 181
>AE013599-3906|AAS64770.1| 545|Drosophila melanogaster CG3522-PB,
isoform B protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 93 HTKLRSWSLYCFLFPIQFICSCHFLYILFMYCIM-VDYSFRIVFSYNTSCISL 248
H ++ +++Y LF + + C FL ++F Y I+ +++ I S + SC+ L
Sbjct: 94 HKQIVEYTIYKSLFDVVAVAICRFLVLIFFYAILYINHWSIIALSTSGSCLFL 146
>AE013599-3905|AAF47232.2| 583|Drosophila melanogaster CG3522-PA,
isoform A protein.
Length = 583
Score = 33.5 bits (73), Expect = 0.31
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 93 HTKLRSWSLYCFLFPIQFICSCHFLYILFMYCIM-VDYSFRIVFSYNTSCISL 248
H ++ +++Y LF + + C FL ++F Y I+ +++ I S + SC+ L
Sbjct: 94 HKQIVEYTIYKSLFDVVAVAICRFLVLIFFYAILYINHWSIIALSTSGSCLFL 146
>BT024957-1|ABE01187.1| 355|Drosophila melanogaster IP15602p
protein.
Length = 355
Score = 33.1 bits (72), Expect = 0.41
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 522 DLWISWEEGAK-IFEDYLLDYDWSLNAGN--WMWLSASAFFYKYFRVYSPVAFGQKTDKE 352
DLW EG + ++E Y DYDW L A + ++ + + F +PV FG K +
Sbjct: 118 DLWNKTREGFRHVWEHYAGDYDWFLKADDDTYVVMENLQHLLRGFDPNTPVFFGYKMSRY 177
Query: 351 GV 346
V
Sbjct: 178 NV 179
>AE014134-484|AAF51199.2| 355|Drosophila melanogaster CG3119-PA,
isoform A protein.
Length = 355
Score = 33.1 bits (72), Expect = 0.41
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 522 DLWISWEEGAK-IFEDYLLDYDWSLNAGN--WMWLSASAFFYKYFRVYSPVAFGQKTDKE 352
DLW EG + ++E Y DYDW L A + ++ + + F +PV FG K +
Sbjct: 118 DLWNKTREGFRHVWEHYAGDYDWFLKADDDTYVVMENLQHLLRGFDPNTPVFFGYKMSRY 177
Query: 351 GV 346
V
Sbjct: 178 NV 179
>AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p
protein.
Length = 338
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 669 WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 553
+T+N +F + EGK G+P + A+ Q KQ+ + H+ R
Sbjct: 210 YTENKSFAEDLTEGKFGFPVIHAVRTQ-KQDKQVLHILR 247
>AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeranyl
pyrophosphate synthaseprotein.
Length = 338
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 669 WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 553
+T+N +F + EGK G+P + A+ Q KQ+ + H+ R
Sbjct: 210 YTENKSFAEDLTEGKFGFPVIHAVRTQ-KQDKQVLHILR 247
>AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA
protein.
Length = 338
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 669 WTKNDAFLKAWAEGKTGYPFVDAIMRQLKQEGWIHHLAR 553
+T+N +F + EGK G+P + A+ Q KQ+ + H+ R
Sbjct: 210 YTENKSFAEDLTEGKFGFPVIHAVRTQ-KQDKQVLHILR 247
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,616,223
Number of Sequences: 53049
Number of extensions: 570966
Number of successful extensions: 1180
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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