Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e24f
(550 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep: C... 100 2e-20
UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella ve... 98 1e-19
UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:... 95 1e-18
UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1; ... 86 6e-16
UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella ve... 85 1e-15
UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4; Ostre... 80 3e-14
UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: C... 78 1e-13
UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genom... 78 1e-13
UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis thalia... 77 4e-13
UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|R... 69 5e-11
UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whol... 69 7e-11
UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whol... 69 9e-11
UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whol... 69 9e-11
UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4; Pezizomy... 68 1e-10
UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-... 59 6e-08
UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 52 7e-06
UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 52 9e-06
UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class ... 52 1e-05
UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 51 2e-05
UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class ... 50 3e-05
UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 50 5e-05
UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;... 49 6e-05
UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family... 49 6e-05
UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;... 49 8e-05
UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 48 1e-04
UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 46 4e-04
UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 46 6e-04
UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 46 8e-04
UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1; Aphroc... 46 8e-04
UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 45 0.001
UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyas... 44 0.002
UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15... 44 0.002
UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16... 44 0.002
UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2; Ara... 44 0.002
UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12... 44 0.003
UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase fa... 43 0.004
UniRef50_Q652J5 Cluster: Deoxyribodipyrimidine photolyase family... 43 0.005
UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular organ... 42 0.007
UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 42 0.009
UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 42 0.012
UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3; Halobacte... 42 0.012
UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 41 0.016
UniRef50_Q1W7G4 Cluster: DNA photolyase protein; n=22; Magnoliop... 41 0.016
UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7; ... 41 0.022
UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 41 0.022
UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3; ... 40 0.038
UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA photoly... 40 0.038
UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 40 0.038
UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 40 0.038
UniRef50_Q2FRR1 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 40 0.038
UniRef50_Q84KJ5 Cluster: Cryptochrome DASH, chloroplast/mitochon... 40 0.038
UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class ... 39 0.066
UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 39 0.066
UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 39 0.088
UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 38 0.12
UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protei... 38 0.15
UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 38 0.15
UniRef50_Q98RW5 Cluster: Putative uncharacterized protein orf272... 38 0.15
UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family... 38 0.20
UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genom... 38 0.20
UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 37 0.27
UniRef50_Q95UQ7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 37 0.27
UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4; ... 37 0.35
UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolya... 37 0.35
UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 37 0.35
UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase, mito... 36 0.47
UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 36 0.62
UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;... 36 0.62
UniRef50_Q5UUY8 Cluster: Class-II photolyase; n=1; Antonospora l... 36 0.62
UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 36 0.82
UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43... 36 0.82
UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1; ... 35 1.1
UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolya... 35 1.1
UniRef50_UPI0000F20186 Cluster: PREDICTED: similar to cell adhes... 34 1.9
UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;... 34 1.9
UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_UPI00004DBE4E Cluster: UPI00004DBE4E related cluster; n... 33 3.3
UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 33 3.3
UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24... 33 3.3
UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia brevis|... 33 3.3
UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5; ... 33 4.4
UniRef50_A2ELU8 Cluster: Dihydroorotate dehydrogenase family pro... 33 4.4
UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q9SB34 Cluster: Putative uncharacterized protein F24A6.... 33 5.8
UniRef50_A7EMR0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q4KT08 Cluster: DNA photolyase 2; n=2; Baculoviridae|Re... 32 7.6
UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;... 32 7.6
UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolya... 32 7.6
UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;... 32 7.6
UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family... 32 7.6
UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;... 32 7.6
UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2; ... 32 7.6
UniRef50_Q5IFN2 Cluster: Cryptochrome DASH, chloroplast/mitochon... 32 7.6
>UniRef50_Q49AN0 Cluster: Cryptochrome-2; n=106; Eumetazoa|Rep:
Cryptochrome-2 - Homo sapiens (Human)
Length = 593
Score = 100 bits (240), Expect = 2e-20
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP--NIKDKVGINRLRFLLQSLEX 314
+HWFR LR+HDN AL A+ A +R +Y LDP VGINR RFLLQSLE
Sbjct: 25 VHWFRKGLRLHDNPALLAAVRGAR----CVRCVYILDPWFAASSSVGINRWRFLLQSLED 80
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 494
+ L+V+RG+ D+ P+LF +W V LT + D +P ++D I +A++ G
Sbjct: 81 LDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAG 140
Query: 495 VFINKRVQHTVYDVHKVL 548
V + HT+YD+ +++
Sbjct: 141 VEVVTENSHTLYDLDRII 158
>UniRef50_A7S6B3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 513
Score = 98.3 bits (234), Expect = 1e-19
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI--NRLRFLLQSLEX 314
+HWFR DLR+HDN AL + + +YFLDP + + NR FLL+SL
Sbjct: 19 MHWFRKDLRLHDNPALLESFKNCQ----AFYGVYFLDPASVQRSNLSPNRWWFLLESLRD 74
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 494
+ L V+RG+ V +PKL D W +K LT + D +P Q+D + +A+ G
Sbjct: 75 LDYNLRSLGSRLLVVRGQPVQEMPKLLDQWNIKRLTLEYDSEPPAKQRDAVVTHLAKNLG 134
Query: 495 VFINKRVQHTVYDVHKVL 548
V + +RV HT+YDV VL
Sbjct: 135 VEVIQRVSHTLYDVETVL 152
>UniRef50_Q52Z99 Cluster: 6-4 photolyase; n=4; Viridiplantae|Rep:
6-4 photolyase - Dunaliella salina
Length = 600
Score = 94.7 bits (225), Expect = 1e-18
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI----KDKVGINRLRFLLQSL 308
I WFR LR+HDN ALR+A + + PI+ +DP +KVG+NR +FLL+SL
Sbjct: 52 ILWFRKGLRLHDNPALRDACTGSA----AVFPIFIIDPYFLQKSNNKVGVNRYQFLLESL 107
Query: 309 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEK 488
+ L VLRG +++P++ DW +K L ++D +P +D ++D+A +
Sbjct: 108 SDLNSSLTSLGSQLLVLRGTPEEVIPRVLRDWSIKKLCYEIDTEPYAKARDARVDDMARE 167
Query: 489 KGVFINKRVQHTVYD 533
GV + K HT+YD
Sbjct: 168 AGVEVKKHWSHTLYD 182
>UniRef50_Q4PCL9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 684
Score = 85.8 bits (203), Expect = 6e-16
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRF 293
MSK V++WFR DLR+HD+ AL+ A+ + + L P++ DPN K +VG+NR RF
Sbjct: 1 MSKHVRVLYWFRTDLRLHDSPALQAAL---DLKPAALFPVWCWDPNYVYKHRVGVNRFRF 57
Query: 294 LLQSLEXXXX--XXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEY 467
LL+S+ + L V+RG+ +LLP+L+ W + +L + D ++D+
Sbjct: 58 LLESMIALSKNITSTQSNSQLLVVRGEPTELLPELWKRWSITHLVFEKDPSAYGRRRDQL 117
Query: 468 IEDIAEKKGVFINKRVQHTVYDVHKVL 548
I + AEK V + H +YD +V+
Sbjct: 118 ILEAAEKSNVKVVAVQGHHLYDPEQVV 144
>UniRef50_A7S6B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 159
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/138 (33%), Positives = 70/138 (50%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 314
T HWFR DLR+HDN AL++A++ A+ ++ L NR +FLLQ L+
Sbjct: 7 TSCHWFRKDLRLHDNPALKDALDNAD----CFYGVFVLSNFHPSITSGNRWKFLLQCLQD 62
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 494
+ L +L G V++ PKL +V LT +VD +P Q+D I IA G
Sbjct: 63 LNNSLEELGSKLIILTGSPVEIFPKLLHSLKVTKLTFEVDTEPFAQQRDSVISHIARSAG 122
Query: 495 VFINKRVQHTVYDVHKVL 548
+ + HT+YD+ ++
Sbjct: 123 IEVKTHASHTLYDIESLV 140
>UniRef50_Q019Z4 Cluster: Cryptochrome-like protein 1; n=4;
Ostreococcus|Rep: Cryptochrome-like protein 1 -
Ostreococcus tauri
Length = 1646
Score = 80.2 bits (189), Expect = 3e-14
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 114 SKMSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRL 287
S +K T++ WFR LR+HDN AL A +P++ LDP +VG NR+
Sbjct: 1094 SAAAKGRTLV-WFRKALRVHDNPALSRGTLHAT----ACQPVFVLDPWFCQPSRVGANRM 1148
Query: 288 RFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEY 467
RFLLQSL + L VL G+ +LP+ W+V +T + DI+P +D
Sbjct: 1149 RFLLQSLRDLDAQLRARGSSLLVLHGEPRVVLPRACKKWRVDSVTWEHDIEPYAKIRDAA 1208
Query: 468 IEDIAEKKGVFINKRVQHTVYDVHKVL 548
+ E+ GV + HT+YDV ++L
Sbjct: 1209 VRGALERAGVECHAASGHTLYDVDEML 1235
>UniRef50_Q7ZYX5 Cluster: Cry4 protein; n=13; Euteleostomi|Rep: Cry4
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 579
Score = 78.2 bits (184), Expect = 1e-13
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Frame = +3
Query: 99 FTL*KSKMSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---K 269
F+ + ++ + IH FR LR+HDN +L A+ + L P+Y LD
Sbjct: 13 FSSWRKSIAMSHRTIHLFRKGLRLHDNPSLLGALASSST----LYPVYVLDRVFLQGAMH 68
Query: 270 VGINRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEF 449
+G R RFLLQSLE + L+VL G ++L +L W + ++ +++P +
Sbjct: 69 MGALRWRFLLQSLEDLDTRLRAIGSRLFVLCGSTANILRELVAQWGITQISYDTEVEPYY 128
Query: 450 VQQDEYIEDIAEKKGVFINKRVQHTVYDVHKVL 548
+ D+ I+ +A++ G+ + HT+YDV +++
Sbjct: 129 TRMDKDIQTVAQENGLQTYTCISHTLYDVKRIV 161
>UniRef50_A7P7Q6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 547
Score = 78.2 bits (184), Expect = 1e-13
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAINEAE--NRKHLLRPIYFL--DPNI----KDKVG 275
M+ + + WFR LRIHDN AL++A E+ ++ P YF+ DPN + G
Sbjct: 1 MASGSSSLMWFRKGLRIHDNPALQHAAKESNCVYPVFVIDP-YFMEPDPNAFSPGSSRAG 59
Query: 276 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQ 455
+NR+RFLL+SL + L VL+G +++ + +W+VK L + D DP +
Sbjct: 60 LNRIRFLLESLVDLDSSLRQLGSRLLVLKGDPGEVIIRCLKEWEVKRLCFEYDTDPYYQA 119
Query: 456 QDEYIEDIAEKKGVFINKRVQHTVYDVHKVL 548
D +++ A G+ + V HT++D +++
Sbjct: 120 LDIKVKNYASAAGIEVFSPVSHTLFDSAEII 150
>UniRef50_O48652 Cluster: 6-4 photolyase; n=3; Arabidopsis
thaliana|Rep: 6-4 photolyase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 537
Score = 76.6 bits (180), Expect = 4e-13
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD-----------KVGINRLRF 293
WFR LR+HDN AL A +E + P++ +DP+ + + G+NR+RF
Sbjct: 10 WFRKGLRVHDNPALEYASKGSE----FMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRF 65
Query: 294 LLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 473
LL+SL+ + L V +G+ ++L + +W+VK L + D DP + D ++
Sbjct: 66 LLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVK 125
Query: 474 DIAEKKGVFINKRVQHTVYD 533
D A GV + V HT+++
Sbjct: 126 DYASSTGVEVFSPVSHTLFN 145
>UniRef50_A4QZX5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 614
Score = 74.1 bits (174), Expect = 2e-12
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLL--QS 305
VI+WFR DLR+HD+ AL+ A+ + +L PI+ DP+ + + G+NR ++LL Q+
Sbjct: 6 VIYWFRTDLRLHDSPALQAAL---DLDPAVLWPIFTWDPHYVYRSRGGLNRWQYLLDCQN 62
Query: 306 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 485
+ L+VLR L PKLF W+V +L + D D Q+DE ++ A+
Sbjct: 63 DLSASITNLNPRSKLFVLREAPQSLFPKLFKAWKVTHLVFEKDTDAYARQRDEVVKKAAQ 122
Query: 486 KKGVFINKRVQHTVYD 533
GV + R T++D
Sbjct: 123 AAGVKVITRYGRTLWD 138
>UniRef50_A2R6W6 Cluster: Cofactor: FAD; n=1; Aspergillus niger|Rep:
Cofactor: FAD - Aspergillus niger
Length = 567
Score = 69.3 bits (162), Expect = 5e-11
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +3
Query: 132 PTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQS 305
PTVI W R DLR+HDN AL+ A++ N + PI+ DP+ + +VG NR RFLL+
Sbjct: 7 PTVIFWHRTDLRLHDNPALQAALSL--NPSTFI-PIFTWDPHYAYQVRVGPNRWRFLLEC 63
Query: 306 LEXXXXXXXXXXTC--LYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 479
L+V+R + PKLF W +L + D D ++DE I +
Sbjct: 64 QNDLSQSYRKLNPKQKLWVVREAPQTVFPKLFKAWGATHLVFESDTDGYARERDETIRKL 123
Query: 480 AEKKGVFINKRVQHTVYDVHKVL 548
A + GV + + T++D +V+
Sbjct: 124 ANEAGVEVIVKSGRTLFDSDEVV 146
>UniRef50_Q4SAM2 Cluster: Chromosome undetermined SCAF14682, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14682,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 606
Score = 68.9 bits (161), Expect = 7e-11
Identities = 30/88 (34%), Positives = 55/88 (62%)
Frame = +3
Query: 285 LRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 464
LRFLLQ LE + L+V+RG+ ++ P+LF +W++ LT + D +P ++D
Sbjct: 19 LRFLLQCLEDLDANLRKLNSRLFVIRGQPANVFPRLFKEWKISRLTFEYDSEPFGKERDA 78
Query: 465 YIEDIAEKKGVFINKRVQHTVYDVHKVL 548
I+ +A++ GV + ++ HT+YD+ K++
Sbjct: 79 AIKKLAKEAGVEVIVKISHTLYDLDKII 106
>UniRef50_Q4T244 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10345,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 662
Score = 68.5 bits (160), Expect = 9e-11
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLEX 314
+HWFR LR+HDN AL+ A++ A++ LR +Y LDP VGINR RFLL++LE
Sbjct: 6 VHWFRKGLRLHDNPALQEALSGADS----LRCVYVLDPWFAGAANVGINRWRFLLEALED 61
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKL 392
+ L+V+RG+ D+ P+L
Sbjct: 62 LDCSLKKLNSRLFVVRGQPTDVFPRL 87
>UniRef50_Q4T243 Cluster: Chromosome undetermined SCAF10345, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10345, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 642
Score = 68.5 bits (160), Expect = 9e-11
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLEX 314
+HWFR LR+HDN AL+ A++ A++ LR +Y LDP VGINR RFLL++LE
Sbjct: 6 VHWFRKGLRLHDNPALQEALSGADS----LRCVYVLDPWFAGAANVGINRWRFLLEALED 61
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKL 392
+ L+V+RG+ D+ P+L
Sbjct: 62 LDCSLKKLNSRLFVVRGQPTDVFPRL 87
>UniRef50_A1CJL8 Cluster: DNA photolyase, putative; n=4;
Pezizomycotina|Rep: DNA photolyase, putative -
Aspergillus clavatus
Length = 613
Score = 68.1 bits (159), Expect = 1e-10
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Frame = +3
Query: 132 PTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLL-- 299
P V++W R DLR+HD+ AL A+ A N + PI+ DP+ + +VG NR +FLL
Sbjct: 3 PVVLYWHRTDLRLHDSPALHAAL--ALNPSIFI-PIWTWDPHYVYRTRVGPNRWKFLLEC 59
Query: 300 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 479
QS L+V+R +LPKL+ WQ+ +L + D D +DE + +
Sbjct: 60 QSDLSAAYTTLNPKQRLWVVREAPQSVLPKLWKKWQITHLVFEQDTDAYARDRDEAVLRM 119
Query: 480 AEKKGVFINKRVQHTVYD 533
A GV + ++ T++D
Sbjct: 120 ARDAGVEVIVQMGRTLFD 137
>UniRef50_O77059 Cluster: CG3772-PA; n=15; Coelomata|Rep: CG3772-PA
- Drosophila melanogaster (Fruit fly)
Length = 542
Score = 59.3 bits (137), Expect = 6e-08
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLLQSLEXXX 320
WFR LR+HDN AL A+ + + L+ P++ D VG NR+RFLL SL+
Sbjct: 10 WFRHGLRLHDNPALLAALADKDQGIALI-PVFIFDGESAGTKNVGYNRMRFLLDSLQDID 68
Query: 321 XXXXXXXTC---LYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 491
L V G+ + +L + ++ + + D +P + ++DE I + +
Sbjct: 69 DQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDESIRSLCREL 128
Query: 492 GVFINKRVQHTVYDVHKVL 548
+ ++V HT++D V+
Sbjct: 129 NIDFVEKVSHTLWDPQLVI 147
>UniRef50_A6EG08 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Pedobacter sp. BAL39|Rep: Deoxyribodipyrimidine
photolyase - Pedobacter sp. BAL39
Length = 410
Score = 52.4 bits (120), Expect = 7e-06
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Frame = +3
Query: 204 EAENRKHLLRPIYFLDPNIKD-------KVGINRLRFLLQSLEXXXXXXXXXXTCLYVLR 362
EA ++ + P+YF DP D K G++R +FLL+S+ L VL
Sbjct: 4 EAISKSDSILPVYFFDPYYFDPTQFNTVKTGMSRTKFLLESVAALRASFQQLGGDLLVLY 63
Query: 363 GKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYD 533
GK +L+ L D +++ + ++ PE Q +ED+ K + + + HT+Y+
Sbjct: 64 GKPEELMAGLVDQYEISEVYHHREVAPEETQISTKVEDLLWKLKINLRHFIGHTLYN 120
>UniRef50_Q116U8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Trichodesmium erythraeum IMS101|Rep:
Deoxyribodipyrimidine photolyase - Trichodesmium
erythraeum (strain IMS101)
Length = 474
Score = 52.0 bits (119), Expect = 9e-06
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLE 311
++ W R DLRI DN+ L A E + + I+ LD NI +D + R+ +++ L+
Sbjct: 5 ILFWHRRDLRISDNVGLTQASQEGQT----VVGIFCLDENILKRDDIASARVTYMIGCLQ 60
Query: 312 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 491
+ L ++ GK ++ +PKL + K + +D++P ++D +++ E
Sbjct: 61 HLQKRYKQIGSQLLIMSGKPIEAIPKLATFLEAKAVYWNLDVEPYSRKRDRQVKENLEAA 120
Query: 492 GV 497
+
Sbjct: 121 NI 122
>UniRef50_Q83CE4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=4; Coxiella burnetii|Rep: Deoxyribodipyrimidine
photolyase-class I - Coxiella burnetii
Length = 472
Score = 51.6 bits (118), Expect = 1e-05
Identities = 34/114 (29%), Positives = 57/114 (50%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 314
T I WFR DLR+ DN AL + A++ HL+ P+Y LD +K +G + +L SL
Sbjct: 2 TTIFWFRQDLRLSDNPAL---VEAAKSADHLI-PLYILDDQLK-MLGDAQRWWLHHSLSS 56
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 476
T L + +G +L +L ++V+ + +P + + D Y+E+
Sbjct: 57 LQTALSKKGTSLILKKGDTKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLEN 110
>UniRef50_A5UYV1 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Roseiflexus sp. RS-1|Rep: Deoxyribodipyrimidine
photo-lyase - Roseiflexus sp. RS-1
Length = 491
Score = 51.2 bits (117), Expect = 2e-05
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEX 314
IHWFR DLR+ DN AL A + R + P++ LD I + G+ R+ F++ +L
Sbjct: 4 IHWFRRDLRLRDNPALSGAAARSGGR---VIPLFILDDAILHAPRTGMARVAFMIAALRD 60
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIE 473
+ L V RG+ D+L L ++ D P Q+D++IE
Sbjct: 61 LDASLRARGSRLVVRRGRPSDVLRDLVGATGAVGVSWNRDYTPFARQRDQHIE 113
>UniRef50_Q6ML17 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=1; Bdellovibrio bacteriovorus|Rep:
Deoxyribodipyrimidine photolyase-class I - Bdellovibrio
bacteriovorus
Length = 435
Score = 50.4 bits (115), Expect = 3e-05
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI---KDKVGINRLR 290
MSK + WFR DLR+ DN L +A+ E + + P++ D I D R+
Sbjct: 1 MSKV--TLFWFRRDLRLDDNAGLYHALKE----RSAVLPLFIFDSEILENLDDPADARVT 54
Query: 291 FLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 470
F+ + ++ + L V GK +++L L D+ V+ + D +P ++DE +
Sbjct: 55 FIYEQIQDMKQQLNAKKSDLIVRHGKPLEVLKTLSDEMAVEAIYANHDYEPAARKRDEKV 114
Query: 471 EDIAEKKGV 497
A K G+
Sbjct: 115 AAWAAKAGI 123
>UniRef50_Q1RKC7 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rickettsia bellii|Rep: Deoxyribodipyrimidine photo-lyase
- Rickettsia bellii (strain RML369-C)
Length = 475
Score = 49.6 bits (113), Expect = 5e-05
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKV---GINRLR 290
M+KT V W R +LR+HDN + A+ ++ + PI+ D I ++ RL
Sbjct: 1 MNKTSIV--WLRRNLRLHDNKSFAAALRNSDK----ILPIFIFDTTILERFKNPHDRRLS 54
Query: 291 FLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 470
FL +L L V GK +D++PKL +++ + D +P +++D+ +
Sbjct: 55 FLANTLCLINDELKKLKGKLLVFYGKPLDIIPKLAATLKIENIYADEDYEPNNIERDKKV 114
Query: 471 EDI 479
+++
Sbjct: 115 QEL 117
>UniRef50_Q0IDI4 Cluster: Deoxyribodipyrimidine photolyase; n=10;
Synechococcus|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain CC9311)
Length = 492
Score = 49.2 bits (112), Expect = 6e-05
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALR--NAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLE 311
V+ W R DLR+ DNL L+ AI+ A ++L P P + RL FL++SL
Sbjct: 6 VLFWHRRDLRLADNLGLQAAEAISPAVTGVYVLDPALIQPPESLPPMAPARLWFLVESLR 65
Query: 312 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 491
+ L V+ G V LLP+L + + D++P ++D + +
Sbjct: 66 ELQQRWRDVGSRLLVVAGDPVQLLPRLASLLEAPAVVWSRDVEPYARERDRQVAKALQAD 125
Query: 492 G 494
G
Sbjct: 126 G 126
>UniRef50_A0M4X6 Cluster: Cryptochrome-like DNA photolyase family
protein; n=6; Flavobacteriales|Rep: Cryptochrome-like
DNA photolyase family protein - Gramella forsetii
(strain KT0803)
Length = 438
Score = 49.2 bits (112), Expect = 6e-05
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Frame = +3
Query: 117 KMSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKD-----KVG 275
K T T + WFR DLRI D+ AL A N E + IY DP +KD K G
Sbjct: 7 KKQTTNTGLVWFRNDLRISDHEALTTACNSHEK----IIGIYCFDPRHYLKDQFGFIKTG 62
Query: 276 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQ 455
R +FL++++E L V + K D++P++ ++ VK V E+ Q
Sbjct: 63 KFRSKFLIETIEELQKNLETLNIELLVFQEKPEDIIPEIISEYSVK----SVYFQKEWTQ 118
Query: 456 QDEYIE 473
++ +E
Sbjct: 119 EEHDVE 124
>UniRef50_UPI0000F1E94A Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 487
Score = 48.8 bits (111), Expect = 8e-05
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLR 290
++ P IHWFR LR+HDN AL+ A+ A+ +R +YFLDP +G+NR R
Sbjct: 423 VNMAPNSIHWFRKGLRLHDNPALQEAVRGADT----VRCVYFLDPWFAGSSNLGVNRWR 477
>UniRef50_A1ZPZ8 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Microscilla marina ATCC 23134|Rep: Deoxyribodipyrimidine
photolyase - Microscilla marina ATCC 23134
Length = 483
Score = 48.0 bits (109), Expect = 1e-04
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Frame = +3
Query: 126 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD-------KVGINR 284
+T I WFR DLR+HDN L A ++A+ L P+Y DP + K G +R
Sbjct: 11 RTQVKIVWFRNDLRVHDNDVLAKAASDAD----YLLPVYCFDPRQYETTSLGFAKTGAHR 66
Query: 285 LRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDE 464
+FL+++L + L + GK +++ L Q K + +I E +
Sbjct: 67 AQFLIETLANLRANLEAKGSGLVIRIGKPEEVIADLAKATQAKAVYASQEIGTEEDATVK 126
Query: 465 YIEDIAEKKGVFI 503
+E K VF+
Sbjct: 127 QLEKRLWKNQVFL 139
>UniRef50_Q11W86 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteroidetes|Rep: Deoxyribodipyrimidine photolyase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 434
Score = 46.4 bits (105), Expect = 4e-04
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD-------PNIKDKVGINRLRFLL 299
I WF+ DLR+HDN L AI +++ + P+Y LD P K G R +FLL
Sbjct: 5 IVWFKTDLRLHDNETLVRAIEQSDE----IIPVYCLDEDHFKITPFGFQKTGNFRAQFLL 60
Query: 300 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 479
+SL + L V+RGK L K+ ++ + + ++ E Q + +E
Sbjct: 61 ESLNDLDTNLRKLGSGLIVVRGKPETELYKIVKQYEAFKVFAKREVAYEEQQTEARVEKE 120
Query: 480 AEKKGVFINKRVQHTVY 530
K G T+Y
Sbjct: 121 IWKLGCTFESFSTSTLY 137
>UniRef50_A7D5J0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Deoxyribodipyrimidine photo-lyase - Halorubrum
lacusprofundi ATCC 49239
Length = 514
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 320
+ W R DLR+ DN+ L A ++ + P++ DP++ D R+R LL L
Sbjct: 3 LFWHRRDLRVADNVGLAAATGTRDDGRGPAAPVFVFDPDVLDHASDVRVRRLLDGLAALR 62
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKL 392
+ L V RG +LP+L
Sbjct: 63 DDYRDRGSDLLVARGAPETVLPEL 86
>UniRef50_A3J6I6 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Flavobacteriales|Rep: Deoxyribodipyrimidine photolyase -
Flavobacteria bacterium BAL38
Length = 486
Score = 45.6 bits (103), Expect = 8e-04
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINR--LRFLLQSLEXXX 320
WF+ DLR+HD+ AL A+ + + K LL +Y +P++ + ++ F+ QSLE
Sbjct: 5 WFKRDLRLHDHEALHEAL--STSGKTLL--LYIFEPSLMKDIHYSQRHFDFIKQSLEALQ 60
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 497
T + +++G+AV + KL ++ + + + ++D + + ++KG+
Sbjct: 61 KELQKYHTQILIIQGEAVPVFQKLTQVISIREIYSHQETGIKLTYERDLAVGKLLKEKGI 120
Query: 498 FINKRVQHTV 527
N+ + + V
Sbjct: 121 IWNEYITNGV 130
>UniRef50_Q86RA1 Cluster: Photolyase related protein; n=1;
Aphrocallistes vastus|Rep: Photolyase related protein -
Aphrocallistes vastus
Length = 563
Score = 45.6 bits (103), Expect = 8e-04
Identities = 31/103 (30%), Positives = 47/103 (45%)
Frame = +3
Query: 162 LRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXXXXXXX 341
LR+ DN AL A+ + ++ + +Y D V R +FL+ LE
Sbjct: 56 LRLKDNTALYQAMAQNPDKFYA---VYIFDGFDSKPVAPVRWQFLIDCLEDLKEQLNGFG 112
Query: 342 TCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYI 470
LY RG+ +D+L L W+VK L+ +D D F +E I
Sbjct: 113 LELYCFRGETIDVLATLVQAWKVKLLSINMDPDVNFTFFNEKI 155
>UniRef50_Q6L055 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Picrophilus torridus|Rep: Deoxyribodipyrimidine
photolyase - Picrophilus torridus
Length = 431
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/119 (24%), Positives = 53/119 (44%)
Frame = +3
Query: 150 FRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXXX 329
FR DLR++DN AL ++N ++ P + + + +N F++ SL
Sbjct: 6 FRRDLRLYDNTALLKSLNNETATIFIMDPAQVKNNEYRSEKALN---FMISSLYDLMTDI 62
Query: 330 XXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFIN 506
L V G VD+L +L + + + D P +++DE I++ + K + N
Sbjct: 63 EGNHGKLAVFHGDPVDVLKRLVNRENINEIYINRDYTPFSIKRDERIKEFSIKNNIKFN 121
>UniRef50_UPI0000E87D35 Cluster: deoxyribodipyrimidine photo-lyase;
n=1; Methylophilales bacterium HTCC2181|Rep:
deoxyribodipyrimidine photo-lyase - Methylophilales
bacterium HTCC2181
Length = 465
Score = 44.4 bits (100), Expect = 0.002
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI---NRLRFLLQSLEXX 317
WFR DLR+HDN AL +A+++++N + ++ D NI + + R+ F+ ++L
Sbjct: 2 WFRRDLRLHDNHALHHALSQSDN----VYCVFIFDKNILNDLKSKEDQRIEFIWEALSEM 57
Query: 318 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGV 497
+ + V+ G + +P L KY D + F +D E A K+ +
Sbjct: 58 KASLNSLSSDITVIHGDPIHAIPLLLK----KY-----DCEALFFNKD--YESYANKRDM 106
Query: 498 FINKRVQHTVYDVHK 542
I + +Q + D ++
Sbjct: 107 RIMEHIQQSSADAYQ 121
>UniRef50_Q55081 Cluster: Deoxyribodipyrimidine photo-lyase; n=15;
Cyanobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Synechocystis sp. (strain PCC 6803)
Length = 488
Score = 44.4 bits (100), Expect = 0.002
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +3
Query: 114 SKMSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRL 287
S S P ++ W R DLR++D+LAL +A + + ++ LD I + + R+
Sbjct: 11 SDQSDHPLILLWHRRDLRLNDHLALA----KARQKTAKIVGVFCLDNKILQAEDMAPARV 66
Query: 288 RFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEY 467
+LL L+ + L V + V LLPKL + +T +D +P ++D
Sbjct: 67 AYLLGCLQSLQDHYQRLGSELLVFQADPVQLLPKLANTLGAHGVTWTLDTEPYAQKRDLA 126
Query: 468 IEDIAEKKGVFI 503
+ ++G+ I
Sbjct: 127 VAQALRERGLAI 138
>UniRef50_P27526 Cluster: Deoxyribodipyrimidine photo-lyase; n=16;
Pezizomycotina|Rep: Deoxyribodipyrimidine photo-lyase -
Neurospora crassa
Length = 642
Score = 44.0 bits (99), Expect = 0.002
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---KVGINRLRFLLQSL 308
V+HWF++DLR+HDN +L A +A+ L +Y L P + + I R+ F+L++L
Sbjct: 137 VVHWFKMDLRLHDNRSLWLASQKAKEAGVPLICLYVLSPEDLEAHLRAPI-RVDFMLRTL 195
Query: 309 EXXXXXXXXXXTCLYV----LRGKAVDLLPKLFDDWQVKYLTCQVDID-PEFVQQDEYIE 473
E L+V R + + +L W +L C ++ + E ++ + ++
Sbjct: 196 EVLKTDLEDLGIPLWVETVEKRKEVPTKIKELMKSWGASHLFCAMEYEVDELRREAKLVK 255
Query: 474 DIAE-KKGVFINKRVQH 521
+AE +KG + V H
Sbjct: 256 LLAEGEKGEKMAADVVH 272
>UniRef50_Q8LB72 Cluster: Blue-light photoreceptor PHR2; n=2;
Arabidopsis thaliana|Rep: Blue-light photoreceptor PHR2
- Arabidopsis thaliana (Mouse-ear cress)
Length = 447
Score = 44.0 bits (99), Expect = 0.002
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-------DKVGINRLRFLLQS 305
WFR DLR+HDN L +A +E + + P+Y DP DK G R +FL++S
Sbjct: 120 WFRNDLRVHDNECLNSANDECVS----VLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIES 175
Query: 306 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 485
+ + L V GK +L +L + + ++ + V+ + IE +
Sbjct: 176 VSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMK 235
Query: 486 KKGVFINKRVQHTVY 530
++GV + T+Y
Sbjct: 236 EEGVEVKYFWGSTLY 250
>UniRef50_A1SER8 Cluster: Deoxyribodipyrimidine photo-lyase; n=12;
Actinomycetales|Rep: Deoxyribodipyrimidine photo-lyase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 453
Score = 43.6 bits (98), Expect = 0.003
Identities = 30/87 (34%), Positives = 41/87 (47%)
Frame = +3
Query: 129 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSL 308
TP V+ WFR DLR+ DN AL A + + P++ LDP + G R +L SL
Sbjct: 5 TPAVL-WFRRDLRLADNPALVEAAADGP-----VLPLFVLDPVLWGPAGAARRAYLGASL 58
Query: 309 EXXXXXXXXXXTCLYVLRGKAVDLLPK 389
T L V+RG L+P+
Sbjct: 59 RALDASLRERGTRLSVVRGDPARLVPR 85
>UniRef50_Q23DL8 Cluster: FAD binding domain of DNA photolyase
family protein; n=9; cellular organisms|Rep: FAD binding
domain of DNA photolyase family protein - Tetrahymena
thermophila SB210
Length = 486
Score = 43.2 bits (97), Expect = 0.004
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +3
Query: 111 KSKMSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--- 281
K+ K I WFR DLR++DN AL NA+ +++N + P++ D I DK+
Sbjct: 49 KNAKQKRKVSIFWFRRDLRLNDNTALYNAL-KSQNE---VVPLFIFDTEILDKLEDKKDA 104
Query: 282 RLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQD 461
R+ F+ + + L V G + +L ++ ++ + D + Q+D
Sbjct: 105 RVEFIHLYIMKIQEQLKQVGSTLIVKHGTVDNAFKELVSEFDIQSVYVNRDYESSAKQRD 164
Query: 462 EYIE 473
E I+
Sbjct: 165 ERIK 168
>UniRef50_Q652J5 Cluster: Deoxyribodipyrimidine photolyase family
protein-like; n=3; Oryza sativa|Rep:
Deoxyribodipyrimidine photolyase family protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 695
Score = 42.7 bits (96), Expect = 0.005
Identities = 29/98 (29%), Positives = 48/98 (48%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXXXX 326
WF+ DLR+ D+ L A+ AE R+ +L P+Y D I D L LL +LE
Sbjct: 49 WFKHDLRVDDHPGLAAAV-AAEPRRPVL-PLYVFDRRILDGYSDTMLELLLFALEDLKMV 106
Query: 327 XXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDID 440
+ L + G A D++ KL ++ Q + + +++
Sbjct: 107 LKSQESDLLIGLGNAEDVVLKLVNEVQAGLIFTEEEVE 144
>UniRef50_Q4KML2 Cluster: Cryptochrome DASH; n=11; cellular
organisms|Rep: Cryptochrome DASH - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 520
Score = 42.3 bits (95), Expect = 0.007
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--------KVG 275
MS + TVI R DLR+HDN A AE H++ P+Y DP K G
Sbjct: 1 MSASRTVICLLRNDLRLHDNEVFHWAQRNAE---HII-PLYCFDPRHYQGTYHYNFPKTG 56
Query: 276 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDD-WQVKYLTCQVDIDPEFV 452
RLRFLL S++ + L V +GK D++ +L V + ++ E
Sbjct: 57 PFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEK 116
Query: 453 QQDEYIEDIAEKKGVFINKRVQHTVY 530
+E +++I + V + T+Y
Sbjct: 117 SVEEKLKEICCQNKVRVQTFWGSTLY 142
>UniRef50_A4A625 Cluster: Deoxyribodipyrimidine photolyase; n=2;
unclassified Gammaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase - Congregibacter
litoralis KT71
Length = 434
Score = 41.9 bits (94), Expect = 0.009
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 320
I+WFR DLR+HDN L A E L P+ N + +G R RF+ +SL+
Sbjct: 4 IYWFRNDLRLHDNPGLVEAAKADELLLLYLWPLQRAWCNTQG-LGEQRERFITESLKALQ 62
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQV 410
L VL+G ++P L D+ V
Sbjct: 63 DDLQPLGQSLLVLQGSPELVIPDLVRDYGV 92
>UniRef50_Q2JW81 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 479
Score = 41.5 bits (93), Expect = 0.012
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = +3
Query: 129 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI--NRLRFLLQ 302
T V+ W R DLR+ DN AL A R + P++ DP + + + R+ FLLQ
Sbjct: 2 TSLVLLWHRRDLRLGDNTALHG----AAQRSPQVVPVFVFDPQLLQRADMAPARVAFLLQ 57
Query: 303 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIA 482
+L+ L RG L +L + + + D+DP QQ+ +
Sbjct: 58 ALQELQERYAQMGIPLLWRRGDPAVELRQLAAELGAQAVFWNEDLDPWARQQESRVRASL 117
Query: 483 EKKGV 497
+ G+
Sbjct: 118 AEAGI 122
>UniRef50_Q5V438 Cluster: Photolyase/cryptochrome; n=3;
Halobacteriaceae|Rep: Photolyase/cryptochrome -
Haloarcula marismortui (Halobacterium marismortui)
Length = 464
Score = 41.5 bits (93), Expect = 0.012
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 320
+ W + DLRI DN L A + E + P+Y LD ++ +G + FLL +
Sbjct: 11 VFWHQRDLRIPDNRGLTAAAADDE-----VLPVYVLDTDLLANIGKRQKAFLLAGVRALK 65
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKLFDDW 404
L V +G AVD+L + D++
Sbjct: 66 QAYRDHGGELLVKKGTAVDVLSNVVDEY 93
>UniRef50_Q2BAD6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Bacillus sp. NRRL B-14911|Rep: Deoxyribodipyrimidine
photolyase - Bacillus sp. NRRL B-14911
Length = 474
Score = 41.1 bits (92), Expect = 0.016
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP-NIKDKVGINRLRFLLQSLEXX 317
I WFR DLRIHD+ L A AE + P+Y +P + + +V ++F + LE
Sbjct: 3 IVWFRKDLRIHDHRPLAEACASAEE----VIPLYIAEPLSGRKEVSRRHIQFAAEGLEQL 58
Query: 318 XXXXXXXXTCLYVLRGKAVDLLPKL 392
L+ +G +D+L +L
Sbjct: 59 DEGLRGLGGRLFAAQGTIIDILEEL 83
>UniRef50_Q1W7G4 Cluster: DNA photolyase protein; n=22;
Magnoliophyta|Rep: DNA photolyase protein - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 189
Score = 41.1 bits (92), Expect = 0.016
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIK-------DKVGINRLRFLLQS 305
WFR DLR+HDN +N A N + +Y DP DK G R FL+ S
Sbjct: 1 WFRNDLRVHDN----ECLNAAHNESMSVLAVYCFDPRDYGKSSSGFDKTGPYRASFLIDS 56
Query: 306 LEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAE 485
+ + L V GK +L +L + + ++ + V+ ++ I+ + +
Sbjct: 57 VADLRKNLQARGSDLVVRIGKPETVLVELAKAVGAEAVYAHREVSHDEVKGEDKIDAVMK 116
Query: 486 KKGVFINKRVQHTVYDV 536
+G+ + T+Y V
Sbjct: 117 DEGLEVKYFWGSTLYHV 133
>UniRef50_Q46H89 Cluster: Deoxyribodipyrimidine photolyase; n=7;
Prochlorococcus marinus|Rep: Deoxyribodipyrimidine
photolyase - Prochlorococcus marinus (strain NATL2A)
Length = 493
Score = 40.7 bits (91), Expect = 0.022
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD---KVGINRLRFLLQSLE 311
I W R DLR DN+ L A ++N K L+ +Y LDP + D + FL +SL
Sbjct: 7 IFWHRRDLRFGDNIGLFEA---SKNSKSLI-GVYVLDPKLLDLNRTTSEAKNWFLGESLI 62
Query: 312 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 491
+ L +L G ++L+ KL + + + +I+P + +D+ I + K+
Sbjct: 63 ELQKNWEIRGSRLLILNGDPIELISKLAELVHAECIYWNENIEPYEINRDKQIAEKLSKE 122
>UniRef50_A4M6R0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Petrotoga mobilis SJ95|Rep: Deoxyribodipyrimidine
photo-lyase - Petrotoga mobilis SJ95
Length = 462
Score = 40.7 bits (91), Expect = 0.022
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLEX 314
+H FR DLR+ DN +L A+ E ++ F D IKD N ++F++ L+
Sbjct: 19 LHIFRRDLRLEDNTSLIEALQSCE---RVIPAFIFDDRQIKDNDYKSDNAVQFMIACLKE 75
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 494
LY G ++ L ++ + D P ++D I+ I E++
Sbjct: 76 LNDQLHQLNARLYFFEGLTAKVVESLIKTLGIEAVFVNKDYTPFSKKRDNEIKAICERER 135
Query: 495 VFINKRVQHTVYDVHKVL 548
V + +++ +VL
Sbjct: 136 VDFKEHFDVLLHEPTEVL 153
>UniRef50_Q3VTE5 Cluster: Deoxyribodipyrimidine photolyase; n=3;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Prosthecochloris aestuarii DSM 271
Length = 477
Score = 39.9 bits (89), Expect = 0.038
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +3
Query: 126 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKD--KVGINRLRFLL 299
K TVI WFR DLR+ DN AL A E + P+Y LD + ++G +L
Sbjct: 2 KRKTVICWFRQDLRLEDNPALFVAAEEG-----YVLPVYILDDSSPGTWQMGSATRCWLH 56
Query: 300 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDI 479
SL L + RG+ +++L L + + + +P +++D+ I+
Sbjct: 57 HSLVSLNRSFDGK---LGIFRGEPLEILKTLARQHKAEKIVWNRCYEPWRMKRDQGIKAT 113
Query: 480 AEKKGVFINKRVQHTVYDVHKVL 548
+ +G+ ++ +++ H+VL
Sbjct: 114 LQAEGIEVSSFNGSLLWEPHEVL 136
>UniRef50_Q3E438 Cluster: DNA photolyase, FAD-binding:DNA
photolyase, N-terminal; n=4; Chloroflexi (class)|Rep:
DNA photolyase, FAD-binding:DNA photolyase, N-terminal -
Chloroflexus aurantiacus J-10-fl
Length = 534
Score = 39.9 bits (89), Expect = 0.038
Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQSLEX 314
IHWFR DLR+ DN AL A A + P++ D I R +FLL L
Sbjct: 58 IHWFRRDLRLRDNTALMAAATAAGG---AVVPVFIFDDAILRGRFASPARTQFLLDCLAA 114
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 494
L V RG + L + + +T D P V++D I+ + G
Sbjct: 115 LDAELRTFGLHLVVRRGDPLRTLFDVLRESGASGVTWNRDYTPYAVRRDTAIKQALREAG 174
Query: 495 VFINKRVQHTVYDVHKV 545
+ ++++ +V
Sbjct: 175 YEAHSFKDTVIFEMKEV 191
>UniRef50_Q15ZK4 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Alteromonadales|Rep: Deoxyribodipyrimidine photolyase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 445
Score = 39.9 bits (89), Expect = 0.038
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENR---KHLLRPIYFLDPNIKD-KVGINRLRFLLQSL 308
I WFR DLR+HDN AL A++E + ++ P +F + + +G R FL QSL
Sbjct: 13 IFWFRHDLRLHDNPAL-VALSEQVDELLCVFIIDPRWFKSSHFQSAHMGDKRWAFLQQSL 71
Query: 309 EXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDW 404
L+VL G+ +++L L +
Sbjct: 72 SELQRHLQEQGQQLFVLEGETLEVLDALIGSY 103
>UniRef50_A0Y3K3 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Alteromonadales bacterium TW-7|Rep:
Deoxyribodipyrimidine photolyase - Alteromonadales
bacterium TW-7
Length = 436
Score = 39.9 bits (89), Expect = 0.038
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +3
Query: 138 VIHWFRLDLRIHDN-LALRNAINE-AENRKHLLRPIYFLDPNIKDK-VGINRLRFLLQSL 308
+++W + DLR++DN + + A+ + A + ++ P +F + N + K G N+ FL+QSL
Sbjct: 5 ILYWLKNDLRLNDNPIFSKLALQQCALDVVFVINPNWFKNTNYQQKQYGENKYTFLMQSL 64
Query: 309 EXXXXXXXXXXTCLYVLRGKAVDLL 383
L+VL G+ V +L
Sbjct: 65 YELQQALIARGQTLHVLEGEPVSVL 89
>UniRef50_Q2FRR1 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Methanospirillum hungatei JF-1|Rep:
Deoxyribodipyrimidine photolyase - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 448
Score = 39.9 bits (89), Expect = 0.038
Identities = 22/88 (25%), Positives = 41/88 (46%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 317
+++W + +R N AL AI + K L ++ LD + + ++ RFL + L+
Sbjct: 20 ILYWMQSAVRTRYNHALEYAIERSNELKKPLIVVFCLDHSYPEATPVH-YRFLWEGLQDV 78
Query: 318 XXXXXXXXTCLYVLRGKAVDLLPKLFDD 401
+L G VD++P++ DD
Sbjct: 79 NRSLTERGIGFQILSGSPVDIIPRIADD 106
>UniRef50_Q84KJ5 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=8;
Magnoliophyta|Rep: Cryptochrome DASH,
chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 569
Score = 39.9 bits (89), Expect = 0.038
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--------KDKVGINRLRFL 296
I WFR DLR+ DN AL A + ++ + P+Y LDP + K G R FL
Sbjct: 87 ILWFRNDLRVLDNDALYKAWSSSDT----ILPVYCLDPRLFHTTHFFNFPKTGALRGGFL 142
Query: 297 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYL-----TCQVDIDPE 446
++ L L + GK ++LP L D+ + + TC ++D E
Sbjct: 143 MECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVE 197
>UniRef50_Q1VSH4 Cluster: Deoxyribodipyrimidine photolyase-class I;
n=13; Bacteroidetes|Rep: Deoxyribodipyrimidine
photolyase-class I - Psychroflexus torquis ATCC 700755
Length = 457
Score = 39.1 bits (87), Expect = 0.066
Identities = 27/143 (18%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Frame = +3
Query: 126 KTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGIN--RLRFLL 299
K + WFR D+R+ DN+ L +A++ + + P++ D NI +++ + R+ F+
Sbjct: 24 KNKVRVFWFRRDMRLEDNVGLYHALSGVFS----VVPLFIFDKNILNELQEDDARISFIF 79
Query: 300 QSLE-XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 476
+ L+ + + + +L D++V+ + D +P Q+D I
Sbjct: 80 EQLQKMRSHLQDHYGSSIATYHSTPEEAFHELLKDFEVEAVYTNRDYEPYAHQRDSKINT 139
Query: 477 IAEKKGVFINKRVQHTVYDVHKV 545
+ +G+ + +++ +V
Sbjct: 140 LLANQGIEFHDFKDQVIFEKTEV 162
>UniRef50_A5GQG9 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Synechococcus sp. RCC307|Rep: Deoxyribodipyrimidine
photolyase - Synechococcus sp. (strain RCC307)
Length = 467
Score = 39.1 bits (87), Expect = 0.066
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALR--NAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 314
+ W R DLR+ DNL L +AI +L P P + R FLL+SL
Sbjct: 5 LFWHRRDLRLADNLGLAAVSAITPEVMGVFVLDPAELEHPTMAPA----RRWFLLESLRE 60
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 494
+ L +L G V+LLP+L + D++P Q+D + + G
Sbjct: 61 LQQRWRQAGSQLLLLEGNPVELLPRLAQQLGAAGVAWNRDVEPLVRQRDRELAAALKAIG 120
Query: 495 V 497
V
Sbjct: 121 V 121
>UniRef50_A0LR66 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Acidothermus cellulolyticus 11B|Rep:
Deoxyribodipyrimidine photo-lyase - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 497
Score = 38.7 bits (86), Expect = 0.088
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 123 SKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQ 302
+K P +++WFR DLR+ D+ AL A A + P++ +DP G NR +FL
Sbjct: 29 TKRP-IVYWFRRDLRLADSPALVAAARAAGAEP--IVPLFVVDPRAGRGAGPNRWQFLAS 85
Query: 303 SLE 311
LE
Sbjct: 86 CLE 88
>UniRef50_A4IYV0 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Francisella tularensis subsp. tularensis (strain
WY96-3418)
Length = 499
Score = 38.3 bits (85), Expect = 0.12
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLR--FLLQSLEX 314
I WF+ DLR+ DNLAL A + + + P+Y ++ + + ++ + FL + LE
Sbjct: 3 IVWFKRDLRVTDNLALSLASEKGD-----ILPLYIIELELWQQPDMSHRQYLFLSECLEE 57
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVK 413
L ++ G AV++ +L + +K
Sbjct: 58 LNTELTKLGQSLAIMLGDAVEIFEQLIQKYNIK 90
>UniRef50_Q6NKC0 Cluster: Putative riboflavin biosynthesis protein;
n=1; Corynebacterium diphtheriae|Rep: Putative
riboflavin biosynthesis protein - Corynebacterium
diphtheriae
Length = 446
Score = 37.9 bits (84), Expect = 0.15
Identities = 30/103 (29%), Positives = 41/103 (39%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 314
+V+ WFR DLR+HDN AL A L +Y + +G +L SL
Sbjct: 4 SVVVWFRDDLRVHDNPALMKAWELVRANPADLHAVYIANEVGVRPLGGAVKWWLHHSLLA 63
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDP 443
L+VL G + LLP+L +T DP
Sbjct: 64 LSEQLAQRGVRLHVLSGDPLTLLPQLVTSCGATAVTMNRRYDP 106
>UniRef50_A4GI46 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
uncultured marine bacterium EB0_41B09
Length = 424
Score = 37.9 bits (84), Expect = 0.15
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLD-PNIKD------KVGINRLRFLL 299
I+WFR DLR+ DNL+L AI ++ + +Y D + KD ++G +R +L
Sbjct: 4 IYWFRNDLRVIDNLSLNEAIESSDE----ILFVYMQDVQSFKDTEWGFSRMGPHRKLYLS 59
Query: 300 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQ-VDIDPEFVQQDE---Y 467
Q L L VD L KL + + + + C+ +D E Q+ +
Sbjct: 60 QGLNALQEKLSNYGHSLNYYLDDTVDGLLKLVEKFHIDRIYCESIDSHEELDQEIRLRGH 119
Query: 468 IEDIAE--KKGVFINKRVQHTVYDVHKV 545
D+ + G+F+N ++ + D+ V
Sbjct: 120 KVDLYSYYQSGLFLNDQIPFNLNDLPDV 147
>UniRef50_Q98RW5 Cluster: Putative uncharacterized protein orf272;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf272 - Guillardia theta (Cryptomonas phi)
Length = 272
Score = 37.9 bits (84), Expect = 0.15
Identities = 25/90 (27%), Positives = 40/90 (44%)
Frame = +3
Query: 123 SKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQ 302
S + +I WFR DLRI+DN + + + N + L +Y D N +L FL Q
Sbjct: 62 SYSEKIILWFRYDLRINDNKLIE--LLKTNNNDYYL--VYCFDKNEIKNYSKKKLTFLKQ 117
Query: 303 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKL 392
S+E L ++ G ++ + L
Sbjct: 118 SVETLRDNLRKLEYNLMIMEGDSISVFKNL 147
>UniRef50_Q0BXN5 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Rhodobacterales|Rep: Deoxyribodipyrimidine
photolyase family protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 536
Score = 37.5 bits (83), Expect = 0.20
Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 3/130 (2%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEXXX 320
WF+ DLR+HD+ AL A+ + P+Y +P + + F+ SLE
Sbjct: 14 WFKRDLRVHDHAALAAAVASGAP----ILPLYIFEPGYWALPEHSRRQFDFVRDSLEELD 69
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYIEDIAEKKGV 497
T L + G A+D+ L + + + ++ +D + A G+
Sbjct: 70 AALKARGTKLVIRMGSAIDVFSALHQKHGIAAIHAHEETGLQWTFDRDRAVRRWARNAGI 129
Query: 498 FINKRVQHTV 527
+ ++ Q+ V
Sbjct: 130 SLREQPQNGV 139
>UniRef50_A7P504 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 564
Score = 37.5 bits (83), Expect = 0.20
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Frame = +3
Query: 111 KSKMSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--------KD 266
++K + + I WFR DLR+ DN AL A ++ + P+Y +DP +
Sbjct: 81 EAKRNGSGVAIVWFRNDLRVLDNEALVKAWASSQ----AVLPVYCVDPRLFGTTHYFGFP 136
Query: 267 KVGINRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKL 392
K G R +FL++ L L + GK ++LP L
Sbjct: 137 KTGALRAQFLIECLADLKRNLMNRGLNLLIQHGKPEEILPSL 178
>UniRef50_A0YV59 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Cyanobacteria|Rep: Deoxyribodipyrimidine photolyase -
Lyngbya sp. PCC 8106
Length = 512
Score = 37.1 bits (82), Expect = 0.27
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLEX 314
I WFR DLR+ DN + + +A + P + +DP + +G R++FL +SL
Sbjct: 3 ILWFRRDLRLIDN----DIVAQAAATDEEILPCFIIDPWFYQQPDIGGMRVQFLFESLAC 58
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKL 392
+ LY+ G +V+++ L
Sbjct: 59 LDGSLRDLGSRLYLFEGNSVEVIQTL 84
>UniRef50_Q95UQ7 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Branchiostoma belcheri|Rep: Deoxyribodipyrimidine
photo-lyase - Branchiostoma belcheri (Amphioxus)
Length = 202
Score = 37.1 bits (82), Expect = 0.27
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 317
+++W D R+ DN AL A A + L + L P + I F+L+ LE
Sbjct: 121 IVYWMSRDQRVQDNWALLYAQQLAMKHQVPLYVCFCLVPKFLE-ASIRHYGFMLKGLEEV 179
Query: 318 XXXXXXXXTCLYVLRGKAVDLLP 386
++L G AVD+LP
Sbjct: 180 ERELQSLDISFHLLTGYAVDVLP 202
>UniRef50_A3JAL3 Cluster: Deoxyribodipyrimidine photolyase; n=4;
Bacteria|Rep: Deoxyribodipyrimidine photolyase -
Marinobacter sp. ELB17
Length = 441
Score = 36.7 bits (81), Expect = 0.35
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAI-NEAENRKHLLRPIYFLDPNIKDK-VGINRLRFLLQSLEX 314
++WF DLR+HDN AL A ++ +++ P +F ++ K +G +R RFL QSL
Sbjct: 4 LYWFTRDLRLHDNAALLAASKSDMLLCVYVVEPRWFKPGPLQCKTMGHHRWRFLWQSLIG 63
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKL 392
L++ G ++P L
Sbjct: 64 LERSLRALGQRLHIAWGDPETVIPAL 89
>UniRef50_A2BUZ7 Cluster: Putative deoxyribodipyrimidine photolyase;
n=3; Prochlorococcus marinus|Rep: Putative
deoxyribodipyrimidine photolyase - Prochlorococcus
marinus (strain MIT 9515)
Length = 503
Score = 36.7 bits (81), Expect = 0.35
Identities = 30/133 (22%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = +3
Query: 141 IHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI-KDKVGINR-LRFLLQSLEX 314
I WF+ DLRI+DN AL ++ + + + PI+ ++ I K +R +F +SL
Sbjct: 6 ILWFKKDLRINDNEALIESLKDRD-----IIPIFIIEKEIWSQKTYSDRQWQFCKESLLD 60
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYL-TCQVDIDPEFVQQDEYIEDIAEKK 491
L + GK +++ ++ +++++K + + Q D ++D+ + A K
Sbjct: 61 LRISLANIGQPLIIRTGKVIEIFDQISNNFEIKAIYSHQETGDYLTYKRDQEVRKWASMK 120
Query: 492 GVFINKRVQHTVY 530
+ + +Q +V+
Sbjct: 121 KIIWKEYLQFSVF 133
>UniRef50_Q6CSJ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 595
Score = 36.7 bits (81), Expect = 0.35
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAEN 215
VIHWFR DLR+ DN L A+N++++
Sbjct: 72 VIHWFRGDLRVRDNTGLAYALNQSKS 97
>UniRef50_P05066 Cluster: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Deoxyribodipyrimidine photo-lyase,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 565
Score = 36.3 bits (80), Expect = 0.47
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 111 KSKMSKTPTVIHWFRLDLRIHDNLALRNAI 200
K+ TV+HWFR DLR++DN+ L ++
Sbjct: 68 KTSFENVSTVMHWFRNDLRLYDNVGLYKSV 97
>UniRef50_Q2S3C6 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Salinibacter ruber DSM 13855|Rep: Deoxyribodipyrimidine
photolyase - Salinibacter ruber (strain DSM 13855)
Length = 483
Score = 35.9 bits (79), Expect = 0.62
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDP-----NIKD--KVGINRLRF 293
T + W R DLR+ D+ LR A + + + P+Y DP + D K+ R RF
Sbjct: 4 TALVWIRNDLRVRDHAPLRYAADHYDQ----VIPVYCFDPRHFGTTMFDLPKMSSIRARF 59
Query: 294 LLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKL 392
L +S++ L V G+ D+LP+L
Sbjct: 60 LRESVQDLRDSVQDLGADLVVRGGRPEDILPEL 92
>UniRef50_A0L6R4 Cluster: Deoxyribodipyrimidine photo-lyase; n=4;
Proteobacteria|Rep: Deoxyribodipyrimidine photo-lyase -
Magnetococcus sp. (strain MC-1)
Length = 476
Score = 35.9 bits (79), Expect = 0.62
Identities = 29/88 (32%), Positives = 40/88 (45%)
Frame = +3
Query: 129 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSL 308
+PTVI WFR DLR+ DN AL A + + P+Y + N + + G R+ LQ
Sbjct: 5 SPTVIVWFRRDLRLSDNPALLAATAMGQ-----VLPVY-IHENNQQEGGGGAWRWGLQQA 58
Query: 309 EXXXXXXXXXXTCLYVLRGKAVDLLPKL 392
C YV G LLP++
Sbjct: 59 LAALNADLQGKLCCYV--GDPARLLPEV 84
>UniRef50_Q5UUY8 Cluster: Class-II photolyase; n=1; Antonospora
locustae|Rep: Class-II photolyase - Antonospora locustae
(Nosema locustae)
Length = 528
Score = 35.9 bits (79), Expect = 0.62
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 317
V++W D R+ DN AL A A L + L P D + RF+L L
Sbjct: 97 VVYWMSRDQRVQDNWALLCAQGIAVRHGLPLFICFCLVPRFLDAT-TRQFRFMLAGLREV 155
Query: 318 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQV 410
+VL+G A + LP+ + ++
Sbjct: 156 ETEALQLGIAFHVLKGSAPEALPRFVEHHKI 186
>UniRef50_A6GLE5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Limnobacter sp. MED105|Rep: Deoxyribodipyrimidine
photolyase - Limnobacter sp. MED105
Length = 453
Score = 35.5 bits (78), Expect = 0.82
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEXXX 320
WF+ DLR+ D++ L A+ A++ L+ P+Y +P+ + F+ + L+
Sbjct: 5 WFKRDLRLSDHMPLFEAMRNAKHH-GLVLPLYIHEPSQILDAHTARQHQLFVHECLDDLQ 63
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV--QQDEYIEDIAEKKG 494
L+ G+AVD+L L ++ +L + +F Q+D + + +G
Sbjct: 64 QQFAKVGGYLHEELGEAVDVLAALHAQFKFTHLWAHQE-TTQFAQYQRDRAVAAWCKSEG 122
Query: 495 VFINKRVQHTV 527
V ++ Q+ V
Sbjct: 123 VVFHELPQNNV 133
>UniRef50_P25078 Cluster: Deoxyribodipyrimidine photo-lyase; n=43;
Gammaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Salmonella typhimurium
Length = 473
Score = 35.5 bits (78), Expect = 0.82
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 132 PTVIHWFRLDLRIHDNLALRNAINEAENR 218
PT + WFR DLR+ DNLAL A +A R
Sbjct: 2 PTHLVWFRRDLRLQDNLALAAACRDASAR 30
>UniRef50_Q47SJ5 Cluster: Deoxyribodipyrimidine photolyase; n=1;
Thermobifida fusca YX|Rep: Deoxyribodipyrimidine
photolyase - Thermobifida fusca (strain YX)
Length = 419
Score = 35.1 bits (77), Expect = 1.1
Identities = 26/123 (21%), Positives = 52/123 (42%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 314
T + F DLR+ D+ AL A+ EA+ + P++ +DP + NR+ +LL++L
Sbjct: 3 TTVVLFTRDLRVSDHPALHAAVTEADR----VVPLFVVDPALVRVSARNRIAYLLEALAE 58
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKG 494
L V +G V ++ + + + D+ V++ + + G
Sbjct: 59 LRGLLRERGGELVVRQGDTVAETVRIVAEAGAQAVYLSADVSAAAVRRARQLTEAVRAAG 118
Query: 495 VFI 503
+
Sbjct: 119 AHV 121
>UniRef50_A4BJR5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Reinekea sp. MED297|Rep: Putative
deoxyribodipyrimidine photolyase - Reinekea sp. MED297
Length = 465
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYF 245
T + WFR DLR+ D+ AL A+N A+ ++ +R ++F
Sbjct: 2 TQLVWFRNDLRVSDHEALFQALNRAKQQQTPVRALFF 38
>UniRef50_UPI0000F20186 Cluster: PREDICTED: similar to cell adhesion
molecule NCAM; n=7; Danio rerio|Rep: PREDICTED: similar
to cell adhesion molecule NCAM - Danio rerio
Length = 1157
Score = 34.3 bits (75), Expect = 1.9
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +3
Query: 30 TARSEIVTYKT------RTFHLFLQN**YFTL*KSKMSKTPTV-IHWFRLDLRIHDN 179
T S+I YKT RTFH FL N + ++ P V IHWFR D IHD+
Sbjct: 580 TTNSQIYVYKTPDFGQTRTFHEFLVN--QTAIIPCMVTGKPEVEIHWFRNDRMIHDD 634
>UniRef50_A1U5B0 Cluster: Deoxyribodipyrimidine photo-lyase; n=1;
Marinobacter aquaeolei VT8|Rep: Deoxyribodipyrimidine
photo-lyase - Marinobacter aquaeolei (strain ATCC 700491
/ DSM 11845 / VT8)(Marinobacter hydrocarbonoclasticus
(strain DSM 11845))
Length = 505
Score = 34.3 bits (75), Expect = 1.9
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINR--LRFLLQSLE 311
V+ WF+ DLR+ D+ L A+ + + P+Y ++P + +R +F+ +SLE
Sbjct: 3 VVVWFKRDLRVEDHGPLYAAVQSGQP----VVPLYVVEPEYWQQPDTSRRQWQFVAESLE 58
Query: 312 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFV-QQDEYI 470
+ L + G+ + L L + + + C + ++ Q+D+ +
Sbjct: 59 SLRKQLKRLGSDLLIAHGEVIRTLDDLKQQYGITQVFCHQETGGDWTFQRDKAV 112
>UniRef50_Q0V6S3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 642
Score = 33.9 bits (74), Expect = 2.5
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 111 KSKMSKTPTVIHWFR-LDLRIHDNLALRNAINEAENRKHLLRPIY 242
+ ++ + V HWF DLRI DN AL +A A+++K L +Y
Sbjct: 147 QEEVKEVTKVAHWFHPKDLRIQDNTALHHASELAQSKKKPLVGVY 191
>UniRef50_UPI00004DBE4E Cluster: UPI00004DBE4E related cluster; n=1;
Xenopus tropicalis|Rep: UPI00004DBE4E UniRef100 entry -
Xenopus tropicalis
Length = 416
Score = 33.5 bits (73), Expect = 3.3
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -2
Query: 483 QQCLQCIHPAVQTQDLYPLDMLNILLASHQIT*AI--DPQLFLSKHTDKCLISLNCYLNL 310
+Q L CIH T+ + ++ SH IT PQ ++ +HTDK ++ +N YL+
Sbjct: 228 EQALSCIHGVRSTK------RVRLVKGSHIITRKFWDGPQAYVIQHTDKRILFINPYLDD 281
Query: 309 LSFVTKTAI 283
L+ + T +
Sbjct: 282 LALIGTTDV 290
>UniRef50_A5WDG4 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Psychrobacter|Rep: Deoxyribodipyrimidine photo-lyase -
Psychrobacter sp. PRwf-1
Length = 550
Score = 33.5 bits (73), Expect = 3.3
Identities = 25/136 (18%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDN----LALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFL 296
+ + WFR DLR+HDN L L + +++ + L+ ++ + P + + I+++ +
Sbjct: 8 SALMWFRRDLRLHDNTALTLLLEQVVQASQHTESCLQAVFVMTPKQWLAHDMSISQVDLM 67
Query: 297 LQSL-EXXXXXXXXXXTCLYVLRGK----AVDLLPKLFDDWQVKYLTCQVDIDPEFVQQD 461
+++L L VL+ + ++D++ D + ++ C + + Q+D
Sbjct: 68 MRTLTHLTRDLHHTLGIKLSVLQAESYSDSIDVIEAFCVDNHITHVGCNYEYEVNEQQRD 127
Query: 462 EYIEDIAEKKGVFINK 509
+ K + N+
Sbjct: 128 TALAKRLSKLNIKFNQ 143
>UniRef50_A1KB68 Cluster: Deoxyribodipyrimidine photo-lyase; n=24;
Betaproteobacteria|Rep: Deoxyribodipyrimidine
photo-lyase - Azoarcus sp. (strain BH72)
Length = 503
Score = 33.5 bits (73), Expect = 3.3
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKV---GINRLRF-------L 296
WFR DLR D+ AL +A+ E E + + D +I D + R+ F L
Sbjct: 30 WFRRDLRCVDHAALYHALREHER----VYCAFVFDTDILDALPTRADRRVEFIHAAVVEL 85
Query: 297 LQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 476
++LE + L V G+A + +P L V + D +P + +D + +
Sbjct: 86 DRALEALSREAGGSGSGLIVRHGRAQEAIPALAQALGVDAVYVNRDYEPAAIARDRAVAE 145
Query: 477 IAEKKGVFINKRVQHTVYDVHKVL 548
+ G + ++D +VL
Sbjct: 146 RLAEHGRTLRDFKDQVIFDRDEVL 169
>UniRef50_Q1G0Y2 Cluster: Cryptochrome dash; n=1; Karenia
brevis|Rep: Cryptochrome dash - Karenia brevis
(Dinoflagellate)
Length = 523
Score = 33.5 bits (73), Expect = 3.3
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRK--HLLRPIYFLDPNIKD--KVGINRLRFLLQSL 308
WFR DLR+ D AL A +A + ++ P F+D + K R RFL++SL
Sbjct: 24 WFRTDLRLDDQPALSTACEDALSLLPIYVFDPAKFIDLTLAGARKSSARRARFLIESL 81
>UniRef50_Q1N8J8 Cluster: Deoxyribodipyrimidine photolyase; n=5;
Sphingomonadales|Rep: Deoxyribodipyrimidine photolyase -
Sphingomonas sp. SKA58
Length = 458
Score = 33.1 bits (72), Expect = 4.4
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 129 TPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDK--VGINRLRFLLQ 302
T V+ WFR DLR+ D AL A +E + P+Y LD + + +G +L
Sbjct: 2 TAPVLLWFRQDLRLSDQAALIAAASEGP-----VVPVYVLDDDTPRQWVMGGASRWWLHH 56
Query: 303 SLEXXXXXXXXXXTCLYVLRGKAVDLLPKL 392
SL + L + RGK+ D+L L
Sbjct: 57 SLASLDRALREKGSRLTLRRGKSADVLQAL 86
>UniRef50_A2ELU8 Cluster: Dihydroorotate dehydrogenase family
protein; n=3; Trichomonas vaginalis G3|Rep:
Dihydroorotate dehydrogenase family protein -
Trichomonas vaginalis G3
Length = 811
Score = 33.1 bits (72), Expect = 4.4
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 351 YVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVY 530
Y+ DL KL ++K L QV I PE +QD I +AE +G+ + VQ +
Sbjct: 675 YLYSWSRPDLRAKLSHYTEMKTLPIQVPI-PEDTKQDRKIPTLAELRGLGAKRVVQRESF 733
Query: 531 DVHKVL 548
D++ L
Sbjct: 734 DINWTL 739
>UniRef50_Q4P1D4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 655
Score = 33.1 bits (72), Expect = 4.4
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Frame = +3
Query: 138 VIHWFRL-DLRIHDNLALRNAINEAENRK------HLLRPIYFLDP---NIKDKVGINRL 287
V++W R+ DLRIHDN AL +A + A R+ HL+ ++ + P + D+ G R+
Sbjct: 124 VVYWMRMHDLRIHDNRALAHASSLAAARRKNGKGGHLI-ALFVITPADYSAHDR-GARRI 181
Query: 288 RFLLQSLEXXXXXXXXXXTCLYVL------RGKAVDLLPKLFDDWQVKYLTCQVDIDPEF 449
F+L++L V R + + + L + LT ++ + +
Sbjct: 182 DFVLRTLASLKSQFDKLDIPFVVYTYSGEDRAQVGEKVFSLCEQCDASQLTANIEYEVDE 241
Query: 450 VQQDEYIEDIAEKKGV 497
+ +D + + +KKGV
Sbjct: 242 LWRDLAMLEAKDKKGV 257
>UniRef50_Q9SB34 Cluster: Putative uncharacterized protein
F24A6.130; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F24A6.130 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 581
Score = 32.7 bits (71), Expect = 5.8
Identities = 22/109 (20%), Positives = 49/109 (44%)
Frame = +3
Query: 114 SKMSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRF 293
S ++ T + WF+ DLR+ D+ L A ++ + P+Y LD I + + L
Sbjct: 29 SATNEGSTAVVWFKHDLRVDDHPGLL-----AASKHRAVIPLYVLDRRILSRYTTDTLEL 83
Query: 294 LLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDID 440
+ +LE + L + G A +++ L + + ++ + +++
Sbjct: 84 AIIALEDLRKTLKKQGSNLMLRYGNAENVIEDLVKEVRAPFVFVEEEVE 132
>UniRef50_A7EMR0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1609
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 384 PKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKKGVFINKRVQHTVYDV 536
P FD WQ+ TC+ +D F QD E ++K + + +R+ + VY +
Sbjct: 244 PAHFDSWQLMGFTCRAIVDLGF-HQDPPGEQQPDRKALDMRRRIFYCVYSL 293
>UniRef50_Q4KT08 Cluster: DNA photolyase 2; n=2; Baculoviridae|Rep:
DNA photolyase 2 - Chrysodeixis chalcites
nucleopolyhedrovirus
Length = 489
Score = 32.3 bits (70), Expect = 7.6
Identities = 26/101 (25%), Positives = 43/101 (42%)
Frame = +3
Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXX 317
V++W D R+ DN AL A A K L ++ + + + + + FL++ LE
Sbjct: 49 VVYWMSRDSRVQDNWALIYAQELAHTAKLPLYVVFCMTKSF-NNASMRQFHFLIKGLEEV 107
Query: 318 XXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDID 440
+L G A DL + +DW ++ C V D
Sbjct: 108 RVECQKLDITFVMLDGSA-DL---VLNDWVREHDICAVVCD 144
>UniRef50_Q834P4 Cluster: Deoxyribodipyrimidine photolyase; n=14;
Bacilli|Rep: Deoxyribodipyrimidine photolyase -
Enterococcus faecalis (Streptococcus faecalis)
Length = 477
Score = 32.3 bits (70), Expect = 7.6
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEXXX 320
WFR DLR+ DN AL +A+ + + +L ++ ++P I++ N L S +
Sbjct: 6 WFRRDLRLQDNKALAHALQNSAADELIL--LFQMNPQQFIQESANHNAFFASLASFKERI 63
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKL---FDDWQVKY 416
L ++ G+ +DL +L DWQ Y
Sbjct: 64 DQEAH----LQIMVGEPLDLFSRLKRKLPDWQAIY 94
>UniRef50_Q1VSH5 Cluster: Putative deoxyribodipyrimidine photolyase;
n=1; Psychroflexus torquis ATCC 700755|Rep: Putative
deoxyribodipyrimidine photolyase - Psychroflexus torquis
ATCC 700755
Length = 485
Score = 32.3 bits (70), Expect = 7.6
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAEN--RKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEXXX 320
WF+ DLR+ D+ L A+ + + ++ PI D + ++ RF+ +SL
Sbjct: 6 WFKRDLRLQDHAPLHLALQKKQPVLLLYIFEPILLKDSHYSER----HFRFIKESLRDIQ 61
Query: 321 XXXXXXXTCLYVLRGKAVDLLPKLFDDWQVK 413
T + ++ G A D+ + +K
Sbjct: 62 KQLEAYHTQVLIVEGNAEDVFKTIHQQLTIK 92
>UniRef50_Q0S6Q2 Cluster: Deoxyribodipyrimidine photo-lyase; n=3;
Corynebacterineae|Rep: Deoxyribodipyrimidine photo-lyase
- Rhodococcus sp. (strain RHA1)
Length = 446
Score = 32.3 bits (70), Expect = 7.6
Identities = 28/114 (24%), Positives = 50/114 (43%)
Frame = +3
Query: 135 TVIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGINRLRFLLQSLEX 314
T + WFR DLR+ D L + ++E+ R ++ LD + G R FL +SL
Sbjct: 3 TALVWFRRDLRLGD-LPTLHTVSESGAR---ALGLFVLDDRLLTTSGGARRDFLFRSLAA 58
Query: 315 XXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIED 476
L V++G VD++P++ + + D P ++D + +
Sbjct: 59 LDDQLDGR---LLVVKGDPVDVVPRVAKKVSAEEVHVSADYGPYGRERDAAVAE 109
>UniRef50_Q0C191 Cluster: Deoxyribodipyrimidine photolyase family
protein; n=2; Alphaproteobacteria|Rep:
Deoxyribodipyrimidine photolyase family protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 485
Score = 32.3 bits (70), Expect = 7.6
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAIN 203
MS I WFR DLR+ DN AL A+N
Sbjct: 1 MSSASPAILWFREDLRLTDNPALNAAVN 28
>UniRef50_Q0APK4 Cluster: Deoxyribodipyrimidine photo-lyase; n=2;
Rhodobacterales|Rep: Deoxyribodipyrimidine photo-lyase -
Maricaulis maris (strain MCS10)
Length = 499
Score = 32.3 bits (70), Expect = 7.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 123 SKTPTVIHWFRLDLRIHDNLALRNAI 200
S T + WFR DLR+HDN AL A+
Sbjct: 5 SATAAALVWFRRDLRLHDNPALWAAV 30
>UniRef50_A4SQP9 Cluster: Deoxyribodipyrimidine photolyase; n=2;
Aeromonas|Rep: Deoxyribodipyrimidine photolyase -
Aeromonas salmonicida (strain A449)
Length = 473
Score = 32.3 bits (70), Expect = 7.6
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 147 WFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPN--IKDKVGINRLRFLLQSLEXXX 320
WFR DLR+ DN ALR+A EA + ++ + P + K+ R +FLL ++
Sbjct: 5 WFRNDLRLADNPALRHACAEAGE----VAALFVISPTQWQQHKMAPIRQQFLLAQVDELG 60
Query: 321 XXXXXXXTCLYVLRGKAVDLLP 386
L++LR + +P
Sbjct: 61 KALAALGIPLHLLRVETFAEMP 82
>UniRef50_Q5IFN2 Cluster: Cryptochrome DASH,
chloroplast/mitochondrial precursor; n=5; Eukaryota|Rep:
Cryptochrome DASH, chloroplast/mitochondrial precursor -
Ostreococcus tauri
Length = 546
Score = 32.3 bits (70), Expect = 7.6
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = +3
Query: 120 MSKTPTVIHWFRLDLRIHDNLALRNAINEAENRKHL-LRPIYFLD-----PNIKD--KVG 275
M +T VI WFR DLR+ DN + A A + + P+Y D P+ + + G
Sbjct: 1 MGRTRVVI-WFRNDLRLLDNACVARAATLASESSDVEVVPVYVFDETYFKPSKRGLARFG 59
Query: 276 INRLRFLLQSLEXXXXXXXXXXTCLYVLRGKAVDLLPKL 392
R +F L+ + + L V GK+ D++ +L
Sbjct: 60 AGRGKFTLECVGDLKTSLRALGSDLLVRCGKSRDVIAEL 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,042,079
Number of Sequences: 1657284
Number of extensions: 8215951
Number of successful extensions: 19845
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 19266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19807
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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