Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e24f
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    93   2e-21
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.76 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.1  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 92.7 bits (220), Expect = 2e-21
 Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
 Frame = +3

Query: 138 VIHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLLQSLE 311
           ++HWFR  LR+HDN +LR  +  A       R ++ LDP       VGIN+ RFLLQ LE
Sbjct: 19  MVHWFRRGLRLHDNPSLREGLKGART----FRCVFVLDPWFAGSSNVGINKWRFLLQCLE 74

Query: 312 XXXXXXXXXXTCLYVLRGKAVDLLPKLFDDWQVKYLTCQVDIDPEFVQQDEYIEDIAEKK 491
                     + L+V+RG+  D LPKLF +W    LT + D +P    +D  +  + ++ 
Sbjct: 75  DLDRSLRKLNSRLFVIRGQPADALPKLFKEWGTTALTFEEDPEPFGGVRDHNLTTLCQEL 134

Query: 492 GVFINKRVQHTVYDVHKVL 548
           G+ + ++V HT+Y +  ++
Sbjct: 135 GISVVQKVSHTLYHLQDII 153


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 129 FWTFYSFKE*SIINFAETNERFL 61
           ++ +YS  E SIINF  T  +F+
Sbjct: 157 YYIYYSVHEASIINFGYTLAKFM 179


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 497 YTFLLSNVFNVFILLYKLRIYIHLT 423
           YT     +  V   L+K RIYI +T
Sbjct: 642 YTTTEKELLGVIFALHKFRIYIQVT 666


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 284 SIYAYFIF 261
           SIYAYFIF
Sbjct: 85  SIYAYFIF 92


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 284 SIYAYFIF 261
           SIYAYFIF
Sbjct: 85  SIYAYFIF 92


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 548 QNFMYIINCMLYSLVNEYTFLLSNVFNVFILLYKL 444
           +NF  I   ++ S V+ + FLL ++  V I   KL
Sbjct: 381 KNFFSITRGLILSFVDYFVFLLCSIL-VNIAFIKL 414


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,954
Number of Sequences: 336
Number of extensions: 2524
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)