Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e23f
(555 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 87 3e-17
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 87 3e-17
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 87 3e-17
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 87 3e-17
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 87 3e-17
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 87 3e-17
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 87 3e-17
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 42 0.002
BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8 (cystatin-re... 29 8.3
BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor p... 29 8.3
BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8 (cystatin-re... 29 8.3
AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8 (cystatin-re... 29 8.3
AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8 (cystatin-re... 29 8.3
AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related epidid... 29 8.3
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 87.4 bits (207), Expect = 3e-17
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Frame = +2
Query: 95 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 271
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 272 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 448
+ DG IEG A + + AKL V KF +LATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 449 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNXI 544
+ H F WIL+RN L + ++ N +
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 87.4 bits (207), Expect = 3e-17
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Frame = +2
Query: 95 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 271
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 272 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 448
+ DG IEG A + + AKL V KF +LATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 449 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNXI 544
+ H F WIL+RN L + ++ N +
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 87.4 bits (207), Expect = 3e-17
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Frame = +2
Query: 95 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 271
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 272 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 448
+ DG IEG A + + AKL V KF +LATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 449 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNXI 544
+ H F WIL+RN L + ++ N +
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 87.4 bits (207), Expect = 3e-17
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Frame = +2
Query: 95 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 271
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 272 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 448
+ DG IEG A + + AKL V KF +LATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 449 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNXI 544
+ H F WIL+RN L + ++ N +
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 87.4 bits (207), Expect = 3e-17
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Frame = +2
Query: 95 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 271
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 272 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 448
+ DG IEG A + + AKL V KF +LATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 449 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNXI 544
+ H F WIL+RN L + ++ N +
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 87.4 bits (207), Expect = 3e-17
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Frame = +2
Query: 95 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 271
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 272 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 448
+ DG IEG A + + AKL V KF +LATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 449 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNXI 544
+ H F WIL+RN L + ++ N +
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 87.4 bits (207), Expect = 3e-17
Identities = 56/152 (36%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Frame = +2
Query: 95 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 271
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 272 HI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKY 448
+ DG IEG A + + AKL V KF +LATDY NYA+ Y+C
Sbjct: 80 ELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC 136
Query: 449 DDKKKSHQVFVWILSRNKKLEGDAKTAVDNXI 544
+ H F WIL+RN L + ++ N +
Sbjct: 137 -IIQLFHVDFAWILARNPNLPPETVDSLKNIL 167
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 41.5 bits (93), Expect = 0.002
Identities = 25/68 (36%), Positives = 34/68 (50%)
Frame = +2
Query: 341 AKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA 520
AKL V KF +LATDY NYA+ Y+C + H F WIL+RN L +
Sbjct: 12 AKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPET 68
Query: 521 KTAVDNXI 544
++ N +
Sbjct: 69 VDSLKNIL 76
>BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 29.5 bits (63), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 110 GTCPELKPVNNFNLTAYQGIWYEISKFPNESE 205
G +LKPVN N Q +W+ + ++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor
protein.
Length = 142
Score = 29.5 bits (63), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 110 GTCPELKPVNNFNLTAYQGIWYEISKFPNESE 205
G +LKPVN N Q +W+ + ++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 29.5 bits (63), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 110 GTCPELKPVNNFNLTAYQGIWYEISKFPNESE 205
G +LKPVN N Q +W+ + ++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 29.5 bits (63), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 110 GTCPELKPVNNFNLTAYQGIWYEISKFPNESE 205
G +LKPVN N Q +W+ + ++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 134
Score = 29.5 bits (63), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 110 GTCPELKPVNNFNLTAYQGIWYEISKFPNESE 205
G +LKPVN N Q +W+ + ++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related
epididymal spermatogenic protein protein.
Length = 142
Score = 29.5 bits (63), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 110 GTCPELKPVNNFNLTAYQGIWYEISKFPNESE 205
G +LKPVN N Q +W+ + ++ ESE
Sbjct: 30 GVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,799,162
Number of Sequences: 237096
Number of extensions: 1257006
Number of successful extensions: 2728
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2712
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -