Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e21r
         (448 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 prote...    23   6.5  
AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 prote...    23   6.5  
AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.    23   6.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   6.5  

>AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 17  RCLIEVICFTISEGECRSITLLWIL 91
           +C++EV+ F    GE +   LL +L
Sbjct: 61  QCVLEVVGFVDGNGEVKESVLLELL 85


>AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 17  RCLIEVICFTISEGECRSITLLWIL 91
           +C++EV+ F    GE +   LL +L
Sbjct: 61  QCVLEVVGFVDGNGEVKESVLLELL 85


>AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 17  RCLIEVICFTISEGECRSITLLWIL 91
           +C++EV+ F    GE +   LL +L
Sbjct: 61  QCVLEVVGFVDGNGEVKESVLLELL 85


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 69  RSLSCGFSSENDPRSLNLHHKEFYGW 146
           R   C    E + R  N++ +EFY W
Sbjct: 377 RYAECSKRKEQN-RMFNINEREFYNW 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,196
Number of Sequences: 2352
Number of extensions: 10933
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)