BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e18r
(766 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 29 0.12
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 29 0.12
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 29 0.16
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 25 3.4
AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein. 24 4.5
AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein. 24 4.5
AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein. 24 4.5
AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein. 24 4.5
AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein. 24 4.5
AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein. 24 4.5
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 23 7.8
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 23 7.8
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 23 7.8
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 29.5 bits (63), Expect = 0.12
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 649 IMQTVAVVIAHPFHVVSVR-MMASFIGKEE-HYSSLLGAIVSIYKDDGILGFLHGLIPKV 476
++ T + +I++PF V R MM S+ K E Y + L V I K +G F G V
Sbjct: 221 VVTTASGIISYPFDTVRRRMMMQSWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNV 280
Query: 475 L 473
L
Sbjct: 281 L 281
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 568 EEHYSSLLGAIVSIYKDDGILGFLHGLIPKVLG 470
E ++ LL + K DGI+G G V G
Sbjct: 153 EREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQG 185
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 29.5 bits (63), Expect = 0.12
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 649 IMQTVAVVIAHPFHVVSVR-MMASFIGKEE-HYSSLLGAIVSIYKDDGILGFLHGLIPKV 476
++ T + +I++PF V R MM S+ K E Y + L V I K +G F G V
Sbjct: 221 VVTTASGIISYPFDTVRRRMMMQSWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNV 280
Query: 475 L 473
L
Sbjct: 281 L 281
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 568 EEHYSSLLGAIVSIYKDDGILGFLHGLIPKVLG 470
E ++ LL + K DGI+G G V G
Sbjct: 153 EREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQG 185
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 29.1 bits (62), Expect = 0.16
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 649 IMQTVAVVIAHPFHVVSVRMM--ASFIGKEEHYSSLLGAIVSIYKDDGILGFLHGLIPKV 476
++ T + +I++PF V RMM + E Y + L V I K +G F G V
Sbjct: 221 VVTTASGIISYPFDTVRRRMMMQSGRAKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNV 280
Query: 475 L 473
L
Sbjct: 281 L 281
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -1
Query: 568 EEHYSSLLGAIVSIYKDDGILGFLHGLIPKVLG 470
E ++ LL + K DGI+G G V G
Sbjct: 153 EREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQG 185
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 24.6 bits (51), Expect = 3.4
Identities = 9/35 (25%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -1
Query: 742 IDLPEINDPPNIVTD-DEPKVEDYIKLGRRDMIMQ 641
++LPE+++P N + + + + + ++ R +M+MQ
Sbjct: 577 VELPEVDNPSNTINERHDQRYANTLQELRNEMVMQ 611
>AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.2 bits (50), Expect = 4.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 269 KLPFMASMLEGFNEKQTTQTWFLPYI*VLHSSDFSISVNINSYIMHLHVGV 117
KLP + +LE F + F+ + L +SIS + Y +H+ V
Sbjct: 102 KLPHLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRKYSKEIHLTV 152
>AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.2 bits (50), Expect = 4.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 269 KLPFMASMLEGFNEKQTTQTWFLPYI*VLHSSDFSISVNINSYIMHLHVGV 117
KLP + +LE F + F+ + L +SIS + Y +H+ V
Sbjct: 102 KLPHLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRKYSKEIHLTV 152
>AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.2 bits (50), Expect = 4.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 269 KLPFMASMLEGFNEKQTTQTWFLPYI*VLHSSDFSISVNINSYIMHLHVGV 117
KLP + +LE F + F+ + L +SIS + Y +H+ V
Sbjct: 102 KLPHLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRKYSKEIHLTV 152
>AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.2 bits (50), Expect = 4.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 269 KLPFMASMLEGFNEKQTTQTWFLPYI*VLHSSDFSISVNINSYIMHLHVGV 117
KLP + +LE F + F+ + L +SIS + Y +H+ V
Sbjct: 102 KLPHLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRKYSKEIHLTV 152
>AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.2 bits (50), Expect = 4.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 269 KLPFMASMLEGFNEKQTTQTWFLPYI*VLHSSDFSISVNINSYIMHLHVGV 117
KLP + +LE F + F+ + L +SIS + Y +H+ V
Sbjct: 102 KLPHLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRKYSKEIHLTV 152
>AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.2 bits (50), Expect = 4.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -3
Query: 269 KLPFMASMLEGFNEKQTTQTWFLPYI*VLHSSDFSISVNINSYIMHLHVGV 117
KLP + +LE F + F+ + L +SIS + Y +H+ V
Sbjct: 102 KLPHLLEVLEEFPSCRPPAAVFVAQLNALQPRFYSISSSPRKYSKEIHLTV 152
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.4 bits (48), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 433 YYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVST 323
Y V+ YF+ + F+ ++ITYPM+ + T
Sbjct: 510 YRVDTYFLGKTIAELPLFIAVPFVFTSITYPMIGLRT 546
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.4 bits (48), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 433 YYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVST 323
Y V+ YF+ + F+ ++ITYPM+ + T
Sbjct: 510 YRVDTYFLGKTIAELPLFIAVPFVFTSITYPMIGLRT 546
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 23.4 bits (48), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 433 YYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVST 323
Y V+ YF+ + F+ ++ITYPM+ + T
Sbjct: 488 YRVDTYFLGKTIAELPLFIAVPFVFTSITYPMIGLRT 524
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,262
Number of Sequences: 2352
Number of extensions: 17014
Number of successful extensions: 41
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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