Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e18f
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical ... 50 9e-07
AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical... 44 8e-05
Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 29 1.9
AC091267-3|AAK31563.3| 339|Caenorhabditis elegans Hypothetical ... 29 1.9
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical pr... 27 10.0
X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein... 27 10.0
>AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical
protein F43E2.11 protein.
Length = 165
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 40 NMDEIEKERIAALPSQILVTTICHPMEYAKVLIQLGYEPLAPR--RSTTLFGRPAMILPN 213
N+D + + I + ++ T HP+ + LIQ GYEP R FG ILPN
Sbjct: 61 NLDHLRQRSIQSEFQTLVAMTSVHPITVVRELIQFGYEPFPTTCGRKYIFFGEEMAILPN 120
Query: 214 VFQYIKYIKASDGFFGCYRGLSA 282
+ Y+K + + F ++GL +
Sbjct: 121 ILSYMKQLSKAKKFSTLFKGLDS 143
>AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical
protein F43E2.7a protein.
Length = 272
Score = 44.0 bits (99), Expect = 8e-05
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = +1
Query: 214 VFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDE 393
+ +K + + G+ + G+ + + L + + + P I P +E
Sbjct: 2 IINLVKQLGTTRGYITLWTGIDSAIAALAVQGIASHRTQQYIDEYYPNIGGPLLNQDKEE 61
Query: 394 PKVED------YIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVS 555
++ D I+ G RD +++ VAV A PF V R +A IG E Y++ A+
Sbjct: 62 DELTDAESFRRVIRNGFRDSVIRVVAVTAARPFAVCFARQVAQVIGNETKYTTCAQALAV 121
Query: 556 IYKDDG 573
I K +G
Sbjct: 122 IGKQEG 127
>Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical
protein F43G9.3 protein.
Length = 294
Score = 35.9 bits (79), Expect = 0.022
Identities = 30/122 (24%), Positives = 47/122 (38%)
Frame = +1
Query: 211 NVFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDD 390
+ ++IK +GFF YRG SA M ++V+ + ++ D
Sbjct: 54 SAIKFIKLTYRENGFFALYRGNSATM----------ARVVPYASMQFAAFEQYKKLLKVD 103
Query: 391 EPKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDD 570
E +K + T A +I +P R+ S + YSSL V YK+
Sbjct: 104 ENGSRTPVKRYITGSLAATTATMITYPLDTAKARLSVS---SKLQYSSLKHVFVKTYKEG 160
Query: 571 GI 576
GI
Sbjct: 161 GI 162
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 35.5 bits (78), Expect = 0.028
Identities = 29/120 (24%), Positives = 54/120 (45%)
Frame = +1
Query: 226 IKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDEPKVE 405
+K IKAS+G Y+GLS+ + +IA+ + + ++ + ++PK
Sbjct: 163 LKKIKASEGVASWYKGLSSALQFVIASRAIFFGIFDSIRTSV------------EDPKSL 210
Query: 406 DYIKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGF 585
++ I T + ++ +P V MM + + Y+S ++YK DGI GF
Sbjct: 211 NFAACWAIAQISITTSGMVCYPLDTVRRSMMMQSGKQIKQYTSTKDCWKTLYKKDGINGF 270
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/69 (34%), Positives = 28/69 (40%)
Frame = +1
Query: 103 ICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSA 282
I P EY K +QL R +T F P +K GFFG YRGLS
Sbjct: 42 ITFPTEYVKTQLQLD-----ERSATPKFRGP-------IDCVKQTVNGHGFFGLYRGLSV 89
Query: 283 RMLGLIAAS 309
+ G I S
Sbjct: 90 LLYGSIPKS 98
>AC091267-3|AAK31563.3| 339|Caenorhabditis elegans Hypothetical
protein Y37B11A.3 protein.
Length = 339
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/69 (34%), Positives = 28/69 (40%)
Frame = +1
Query: 103 ICHPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSA 282
I P EY K +QL R +T F P +K GFFG YRGLS
Sbjct: 28 ITFPTEYVKTQLQLD-----ERSATPKFRGP-------IDCVKQTVNGHGFFGLYRGLSV 75
Query: 283 RMLGLIAAS 309
+ G I S
Sbjct: 76 LLYGSIPKS 84
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +1
Query: 109 HPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSARM 288
HP++ KV +Q P R T F K I +GF G Y+G+S+ +
Sbjct: 22 HPLDTVKVRLQTQSGPTPQYRGT-------------FHCFKLIVQKEGFRGLYKGMSSPL 68
Query: 289 LGLIAASQLTSKVIVAVGIDLPEINDPPNIVT 384
L L S + + V G ++ DP +I +
Sbjct: 69 LSL---SAINAIVFGVHGGTCRQMEDPDSITS 97
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +1
Query: 109 HPMEYAKVLIQLGYEPLAPRRSTTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSARM 288
HP++ KV +Q P R T F K I +GF G Y+G+S+ +
Sbjct: 22 HPLDTVKVRLQTQSGPTPQYRGT-------------FHCFKLIVQKEGFRGLYKGMSSPL 68
Query: 289 LGLIAASQLTSKVIVAVGIDLPEINDPPNIVT 384
L L S + + V G ++ DP +I +
Sbjct: 69 LSL---SAINAIVFGVHGGTCRQMEDPDSITS 97
>Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical
protein F56D5.6 protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.7
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +1
Query: 346 DLPEINDPPNIVTDDEPKVEDYIKLGR 426
++ E+N+ N++ D++ +ED ++L R
Sbjct: 292 NVEEVNESGNVILDEDENIEDNVELAR 318
>Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical
protein F21G4.1 protein.
Length = 640
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 442 QTVAVVIAHPFHVVSVRMMASFIGKEEHYSSLLGAIVSIYKDDGILGFL 588
Q A + A PF+ ++ + S + ++ LLG + S+Y LGF+
Sbjct: 163 QLFAGIFAAPFNTIAYVYIDSNVKQKRESPFLLGLLTSMYAFGPALGFM 211
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 172 STTLFGRPAMILPNVFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKV 327
+T F + + PNV + IK + +D Y + R+ GL+ S+++ ++
Sbjct: 397 TTAAFNKHVIANPNVLEEIKLLDINDKNAEYYEDVGKRIEGLLFESEVSQEL 448
>Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical
protein T09F3.2 protein.
Length = 384
Score = 27.1 bits (57), Expect = 10.0
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 214 VFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDE 393
++Q IK + +GF G Y+G++A G+ G+ L + N+ D+
Sbjct: 241 IWQMIKRVYHREGFKGFYKGVTASYAGVSETMIQFCIYEYFRGVLLSDANEM------DK 294
Query: 394 PKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRM 495
K+ D++ + +A V+A+P VV R+
Sbjct: 295 RKM-DFLNFMVAGGSAKFIACVVAYPHEVVRTRL 327
>X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein
(c2) protein.
Length = 384
Score = 27.1 bits (57), Expect = 10.0
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 214 VFQYIKYIKASDGFFGCYRGLSARMLGLIAASQLTSKVIVAVGIDLPEINDPPNIVTDDE 393
++Q IK + +GF G Y+G++A G+ G+ L + N+ D+
Sbjct: 241 IWQMIKRVYHREGFKGFYKGVTASYAGVSETMIQFCIYEYFRGVLLSDANEM------DK 294
Query: 394 PKVEDYIKLGRRDMIMQTVAVVIAHPFHVVSVRM 495
K+ D++ + +A V+A+P VV R+
Sbjct: 295 RKM-DFLNFMVAGGSAKFIACVVAYPHEVVRTRL 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,120,697
Number of Sequences: 27780
Number of extensions: 303575
Number of successful extensions: 722
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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