Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e17r
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     26   1.0  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    24   5.6  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   7.4  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 488 YRRPTRVLYHPKGRLVLHPTKVSISSNT-SARTSQKAVCVQ 607
           + RPT     P+G  V  PT    S+ T +A T+Q+A   +
Sbjct: 113 FHRPTTSTAAPEGTSVASPTTAEASTTTEAATTTQEATTTE 153


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 135 YILGMSCLIIMMLLTFNYYYFYIL 64
           Y LG   ++  + +TFNY Y   L
Sbjct: 126 YFLGADAMVSTLNVTFNYTYMLYL 149


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 448 SGGQYEVRHVYMK*RLKRWTPRERRASLPASDFVTNAT 335
           S  Q  VRH   + +  +++P     +L A+DFV  A+
Sbjct: 275 SSSQRRVRHAGRRWKASQFSPSSFLEALFAADFVQRAS 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,959
Number of Sequences: 2352
Number of extensions: 12903
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)