Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e17r
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128711-1|BAC87585.1|  206|Homo sapiens protein ( Homo sapiens ...    32   1.8  
AY141972-1|AAN10255.1| 1738|Homo sapiens putative 4 repeat volta...    31   3.2  
AL356778-1|CAI16648.1| 1738|Homo sapiens voltage gated channel l...    31   3.2  
AL354891-1|CAH73919.1| 1738|Homo sapiens voltage gated channel l...    31   3.2  
AL138707-1|CAI40711.1| 1738|Homo sapiens voltage gated channel l...    31   3.2  
BC036354-1|AAH36354.1|  242|Homo sapiens PCSK4 protein protein.        30   9.8  
AY358963-1|AAQ89322.1|  755|Homo sapiens prohormone convertase p...    30   9.8  

>AK128711-1|BAC87585.1|  206|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46878 fis, clone UTERU3014906. ).
          Length = 206

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 22/65 (33%), Positives = 33/65 (50%)
 Frame = +2

Query: 392 PAF*SSLHIYMSDFILAAAKSMPKIYYYNTFTYRRPTRVLYHPKGRLVLHPTKVSISSNT 571
           P+  SS+ +++  FIL      P I+ Y   ++  P     HP   L LHPT + IS++ 
Sbjct: 3   PSIHSSIDLFIHLFIL------PSIHLYIHLSFHLPIYYFIHPSIPLSLHPT-ILISTHL 55

Query: 572 SARTS 586
            A TS
Sbjct: 56  FAHTS 60


>AY141972-1|AAN10255.1| 1738|Homo sapiens putative 4 repeat
            voltage-gated ion channel protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 162  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 76
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL356778-1|CAI16648.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 162  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 76
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL354891-1|CAH73919.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 162  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 76
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>AL138707-1|CAI40711.1| 1738|Homo sapiens voltage gated channel like 1
            protein.
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -2

Query: 162  YCSFYLIIAYILGMSCLIIMMLLTFNYYY 76
            +CSFY+IIAYI+ ++ L+ +++  F+ +Y
Sbjct: 1427 FCSFYVIIAYIM-LNLLVAIIVENFSLFY 1454


>BC036354-1|AAH36354.1|  242|Homo sapiens PCSK4 protein protein.
          Length = 242

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 461 KIYYYNTFTYRRPTRVLYHPKGRLVLHPTKVSISSNTSARTSQKAVC 601
           K YY+NT T  R T +LY     +   PT   ++S+   +   + +C
Sbjct: 46  KGYYFNTGTLYRYTLLLYGTAEDMTARPTGPQVTSSACVQRDTEGLC 92


>AY358963-1|AAQ89322.1|  755|Homo sapiens prohormone convertase
           protein.
          Length = 755

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 461 KIYYYNTFTYRRPTRVLYHPKGRLVLHPTKVSISSNTSARTSQKAVC 601
           K YY+NT T  R T +LY     +   PT   ++S+   +   + +C
Sbjct: 559 KGYYFNTGTLYRYTLLLYGTAEDMTARPTGPQVTSSACVQRDTEGLC 605


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,445,859
Number of Sequences: 237096
Number of extensions: 1860515
Number of successful extensions: 3391
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3391
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)