Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e17f
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    29   0.12 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   5.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.8  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   7.7  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +1

Query: 418 SEDGQDRGGVPHPQRADE*--LHRRHQGGSRRQDGDPRGKTRGLHQR 552
           ++ G  + GV  PQ++ +    HR+HQ    +Q+G  + +  G+HQ+
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +2

Query: 152 DAVQLVRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVG 292
           D  +LV S  R +V         T I    +  GG       +EP+G
Sbjct: 9   DDTELVNSTIRSEVTCPNHNISGTAIGTTNIQSGGDGVAAAASEPIG 55


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +2

Query: 329 TPSVEEIQEKLKAAEERR 382
           TP++EE++ + + AE+R+
Sbjct: 298 TPAIEELENECRIAEQRQ 315


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 294 TPTGSASITSYARPPFDISWQRISVDLVSTSMAST 190
           TP    S+  +ARP  +++   +S+   +T +A T
Sbjct: 650 TPNSVGSLQEFARPYRNMATTPVSIRFTNTVIART 684


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,299
Number of Sequences: 2352
Number of extensions: 7570
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)