Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e17f
(606 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p pro... 136 2e-32
AF202989-1|AAG35632.1| 174|Drosophila melanogaster STATHMIN-13 ... 136 2e-32
AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14 ... 136 2e-32
AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1 p... 136 2e-32
AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-P... 136 2e-32
AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p pro... 132 4e-31
AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19 ... 132 4e-31
AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-P... 132 4e-31
AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-P... 132 4e-31
AY058638-1|AAL13867.1| 492|Drosophila melanogaster LD33732p pro... 29 6.5
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro... 29 6.5
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,... 29 6.5
AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,... 29 6.5
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,... 29 6.5
AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p pro... 28 8.6
AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p pro... 28 8.6
AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p pro... 28 8.6
AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog... 28 8.6
AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing fac... 28 8.6
AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-P... 28 8.6
AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA... 28 8.6
AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA... 28 8.6
>BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p
protein.
Length = 257
Score = 136 bits (330), Expect = 2e-32
Identities = 71/133 (53%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
Frame = +2
Query: 206 VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEERR 382
V+T++TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEERR
Sbjct: 6 VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65
Query: 383 RSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRS 562
SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 66 ISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKE 125
Query: 563 RLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 126 KLKIHAQDIEKTR 138
>AF202989-1|AAG35632.1| 174|Drosophila melanogaster STATHMIN-13
protein.
Length = 174
Score = 136 bits (330), Expect = 2e-32
Identities = 71/133 (53%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
Frame = +2
Query: 206 VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEERR 382
V+T++TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEERR
Sbjct: 6 VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65
Query: 383 RSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRS 562
SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 66 ISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKE 125
Query: 563 RLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 126 KLKIHAQDIEKTR 138
>AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14
protein.
Length = 257
Score = 136 bits (330), Expect = 2e-32
Identities = 71/133 (53%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
Frame = +2
Query: 206 VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEERR 382
V+T++TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEERR
Sbjct: 6 VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65
Query: 383 RSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRS 562
SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 66 ISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKE 125
Query: 563 RLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 126 KLKIHAQDIEKTR 138
>AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1
protein.
Length = 234
Score = 136 bits (330), Expect = 2e-32
Identities = 71/133 (53%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
Frame = +2
Query: 206 VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEERR 382
V+T++TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEERR
Sbjct: 6 VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65
Query: 383 RSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRS 562
SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 66 ISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKE 125
Query: 563 RLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 126 KLKIHAQDIEKTR 138
>AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-PC,
isoform C protein.
Length = 257
Score = 136 bits (330), Expect = 2e-32
Identities = 71/133 (53%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
Frame = +2
Query: 206 VETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEERR 382
V+T++TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEERR
Sbjct: 6 VDTEATEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERR 65
Query: 383 RSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRS 562
SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 66 ISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKE 125
Query: 563 RLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 126 KLKIHAQDIEKTR 138
>AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p
protein.
Length = 250
Score = 132 bits (319), Expect = 4e-31
Identities = 70/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 203 EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEER 379
+V+ +TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEER
Sbjct: 50 KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 109
Query: 380 RRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELR 559
R SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 110 RISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMK 169
Query: 560 SRLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 170 EKLKIHAQDIEKTR 183
>AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19
protein.
Length = 254
Score = 132 bits (319), Expect = 4e-31
Identities = 70/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 203 EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEER 379
+V+ +TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEER
Sbjct: 2 KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 61
Query: 380 RRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELR 559
R SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 62 RISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMK 121
Query: 560 SRLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 122 EKLKIHAQDIEKTR 135
>AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-PA,
isoform A protein.
Length = 250
Score = 132 bits (319), Expect = 4e-31
Identities = 70/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 203 EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEER 379
+V+ +TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEER
Sbjct: 50 KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 109
Query: 380 RRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELR 559
R SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 110 RISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMK 169
Query: 560 SRLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 170 EKLKIHAQDIEKTR 183
>AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-PB,
isoform B protein.
Length = 302
Score = 132 bits (319), Expect = 4e-31
Identities = 70/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 203 EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEKLKAAEER 379
+V+ +TEIRCQE S+GGL+YEVILAEP V VP+R +P K SVEEI++KLKAAEER
Sbjct: 50 KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEER 109
Query: 380 RRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELR 559
R SLE +R + E TN FI TKE L++KME H EKREA I++++
Sbjct: 110 RISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMK 169
Query: 560 SRLKDHLEGVEKTR 601
+LK H + +EKTR
Sbjct: 170 EKLKIHAQDIEKTR 183
>AY058638-1|AAL13867.1| 492|Drosophila melanogaster LD33732p
protein.
Length = 492
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 284 PVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLE 394
P P PR+ KTP ++E+++++ +E R S++
Sbjct: 389 PSPKPTPRKQKKRSKTPELKEVKKEISPRKESRVSVK 425
>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
protein.
Length = 1062
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 284 PVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLE 394
P P PR+ KTP ++E+++++ +E R S++
Sbjct: 746 PSPKPTPRKQKKRSKTPELKEVKKEISPRKESRVSVK 782
>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
isoform A protein.
Length = 1062
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 284 PVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLE 394
P P PR+ KTP ++E+++++ +E R S++
Sbjct: 746 PSPKPTPRKQKKRSKTPELKEVKKEISPRKESRVSVK 782
>AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,
isoform D protein.
Length = 849
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 284 PVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLE 394
P P PR+ KTP ++E+++++ +E R S++
Sbjct: 746 PSPKPTPRKQKKRSKTPELKEVKKEISPRKESRVSVK 782
>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
isoform C protein.
Length = 1107
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 284 PVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLE 394
P P PR+ KTP ++E+++++ +E R S++
Sbjct: 746 PSPKPTPRKQKKRSKTPELKEVKKEISPRKESRVSVK 782
>AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p
protein.
Length = 895
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 212 TKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRR 385
++ T+I E L + E + +P S E T S+EEI LKA E+++R
Sbjct: 599 SEETDIASDEDDHIELPTRIEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQR 656
>AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p
protein.
Length = 513
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +1
Query: 319 TRKDSFRRRDPREAEGSRREET*LG-S**DGRHCSEDGQDRGGVPHPQRADE*LHRRHQG 495
+ + + RRR R RR + S G+H S R H + + R +G
Sbjct: 303 SHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRRSSSRSRRSRSRG 362
Query: 496 GSRRQDGDPRGK-TRGLHQRAALPSQGS 576
G + RGK +R H+R+ S+ S
Sbjct: 363 GKHSRSSRSRGKRSRSRHRRSTSRSRSS 390
>AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p
protein.
Length = 571
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 448 PHPQRADE*LHRRHQGGSRRQDGDPRGKT-RGLHQRAAL 561
PH + H+ H S +G P G T GLH +AL
Sbjct: 74 PHQSPQHQQQHQHHPCSSNSSNGSPNGSTGLGLHPHSAL 112
>AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog
PMS2 protein.
Length = 893
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 212 TKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRR 385
++ T+I E L + E + +P S E T S+EEI LKA E+++R
Sbjct: 597 SEETDIASDEDDHIELPTRIEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQR 654
>AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing factor
SRp54 protein.
Length = 513
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +1
Query: 319 TRKDSFRRRDPREAEGSRREET*LG-S**DGRHCSEDGQDRGGVPHPQRADE*LHRRHQG 495
+ + + RRR R RR + S G+H S R H + + R +G
Sbjct: 303 SHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRRSSSRSRRSRSRG 362
Query: 496 GSRRQDGDPRGK-TRGLHQRAALPSQGS 576
G + RGK +R H+R+ S+ S
Sbjct: 363 GKHSRSSRSRGKRSRSRHRRSTSRSRSS 390
>AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-PA
protein.
Length = 571
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 448 PHPQRADE*LHRRHQGGSRRQDGDPRGKT-RGLHQRAAL 561
PH + H+ H S +G P G T GLH +AL
Sbjct: 74 PHQSPQHQQQHQHHPCSSNSSNGSPNGSTGLGLHPHSAL 112
>AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA
protein.
Length = 513
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +1
Query: 319 TRKDSFRRRDPREAEGSRREET*LG-S**DGRHCSEDGQDRGGVPHPQRADE*LHRRHQG 495
+ + + RRR R RR + S G+H S R H + + R +G
Sbjct: 303 SHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRRSSSRSRRSRSRG 362
Query: 496 GSRRQDGDPRGK-TRGLHQRAALPSQGS 576
G + RGK +R H+R+ S+ S
Sbjct: 363 GKHSRSSRSRGKRSRSRHRRSTSRSRSS 390
>AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA
protein.
Length = 899
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 212 TKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRR 385
++ T+I E L + E + +P S E T S+EEI LKA E+++R
Sbjct: 603 SEETDIASDEDDHIELPTRIEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQR 660
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,961,353
Number of Sequences: 53049
Number of extensions: 362622
Number of successful extensions: 1576
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -