Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e17f
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 30 1.1
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 30 1.1
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 30 1.1
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 30 1.1
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 30 1.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.4
Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical p... 28 5.9
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 5.9
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 28 5.9
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 461 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKD 574
EQ N + +E LDAK + HE+ + A +++S+ D
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDD 368
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 461 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKD 574
EQ N + +E LDAK + HE+ + A +++S+ D
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDD 368
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 461 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKD 574
EQ N + +E LDAK + HE+ + A +++S+ D
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDD 368
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 461 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKD 574
EQ N + +E LDAK + HE+ + A +++S+ D
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDD 368
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.9 bits (64), Expect = 1.5
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +2
Query: 323 EKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 502
E +VE + E L+A +E+ LE ++ SE + + EA+
Sbjct: 148 EHKEAVETLVEALRAEKEK---LEKILEDARKKDDEIEELKKKVNSESSRATLA--DEAV 202
Query: 503 DAKMETHEEK-REAYINELRS---RLKDHLEGVEK 595
K++T ++K E Y+N++R LKD+ EG+EK
Sbjct: 203 Q-KLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEK 236
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 328 DSFRRRDPREAEGSRREET*LGS**DGRHCSEDGQDRGGVPHP 456
D+F+ + R ++GS +GS DG CS D + P P
Sbjct: 351 DTFKNQSRRSSQGSHDSAITMGSEEDGSRCSPDRDKQTPSPAP 393
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 328 DSFRRRDPREAEGSRREET*LGS**DGRHCSEDGQDRGGVPHP 456
D+F+ + R ++GS +GS DG CS D + P P
Sbjct: 351 DTFKNQSRRSSQGSHDSAITMGSEEDGSRCSPDRDKQTPSPAP 393
>Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +2
Query: 308 RADSPEKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXX-SRIRSEQTNNFIV 484
R+D E + ++Q +L ++++R LE SRI +E T +
Sbjct: 336 RSDMEELEAQIRDLQSQL--SDQKRTHLEEKQTWDSTIGLLNEKVECSRIENEFTKQEMK 393
Query: 485 ATKEALDAKMETHEEKREAYINELRSRLKD 574
+ +KM E + I++LRSR++D
Sbjct: 394 RQGDQHQSKMLEKENELRKTISDLRSRMRD 423
>Z81130-13|CAB03421.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +2
Query: 308 RADSPEKTPSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXX-SRIRSEQTNNFIV 484
R+D E + ++Q +L ++++R LE SRI +E T +
Sbjct: 336 RSDMEELEAQIRDLQSQL--SDQKRTHLEEKQTWDSTIGLLNEKVECSRIENEFTKQEMK 393
Query: 485 ATKEALDAKMETHEEKREAYINELRSRLKD 574
+ +KM E + I++LRSR++D
Sbjct: 394 RQGDQHQSKMLEKENELRKTISDLRSRMRD 423
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 515 ETHEEKR--EAYINELRSRLKDHLEGVEKTR 601
E HE K+ E +NEL R K HL+ +E+ R
Sbjct: 422 EFHEYKKQQEVIVNELNHREKAHLDTIEQLR 452
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 290 GVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSL 391
GVP+P+ EK +E +EK+K+ EE R L
Sbjct: 179 GVPIPKIDIEIEKASPKKEKKEKVKSPEELTRRL 212
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = -1
Query: 294 TPTGSASITSYARPPFDISWQRISVDLVSTSMASTFNRQRLRTS*TASDDHNRQTDNKCR 115
TP + + S PP S R + ++++ STFNR + + DD D+
Sbjct: 62 TPKSAPAPKSPKSPPARRSIPRAAATAANSTINSTFNRSEIEEMSDSDDDMRDDDDDDEE 121
Query: 114 IIRNK 100
I+ K
Sbjct: 122 ILSPK 126
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = -1
Query: 294 TPTGSASITSYARPPFDISWQRISVDLVSTSMASTFNRQRLRTS*TASDDHNRQTDNKCR 115
TP + + S PP S R + ++++ STFNR + + DD D+
Sbjct: 62 TPKSAPAPKSPKSPPARRSIPRAAATAANSTINSTFNRSEIEEMSDSDDDMRDDDDDDEE 121
Query: 114 IIRNK 100
I+ K
Sbjct: 122 ILSPK 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,580,612
Number of Sequences: 27780
Number of extensions: 182682
Number of successful extensions: 817
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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