Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e14f
         (629 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.                  238   1e-62
BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.       238   1e-62
BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.       238   1e-62
BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.       238   1e-62
AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13 p...   238   1e-62
BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13 p...   235   1e-61
AB007172-1|BAA25832.1|   65|Homo sapiens ribosomal protein L13 p...    64   3e-10

>X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  238 bits (582), Expect = 1e-62
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  235 bits (574), Expect = 1e-61
 Identities = 117/191 (61%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRC TVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGA 594
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 595 RSIAKLVGIRA 627
           R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196


>AB007172-1|BAA25832.1|   65|Homo sapiens ribosomal protein L13
           protein.
          Length = 65

 Score = 64.5 bits (150), Expect = 3e-10
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = +1

Query: 472 KLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRA 627
           KLATQL GP+MPV+    K  AR ITE+EKNFKA+  LR AR+ A+L GIRA
Sbjct: 2   KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRA 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,355,398
Number of Sequences: 237096
Number of extensions: 1890407
Number of successful extensions: 4236
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4221
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)