Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e10f
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.               30   8.0  
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si...    30   8.0  
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.                  30   8.0  

>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
          Length = 2035

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 201  CATLWAINYPPICRFNHGYVKSKIRERTIVFIIIDLPDIVWKFRVII 341
            C +L    Y P+ RF H  + +K R  T V+ ++ L D+V  F +II
Sbjct: 1445 CLSLAQGTYRPLRRFFHDILHTKYRAATDVYALMFLADVV-DFIIII 1490


>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
            similarity 38, member A protein.
          Length = 2035

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 201  CATLWAINYPPICRFNHGYVKSKIRERTIVFIIIDLPDIVWKFRVII 341
            C +L    Y P+ RF H  + +K R  T V+ ++ L D+V  F +II
Sbjct: 1445 CLSLAQGTYRPLRRFFHDILHTKYRAATDVYALMFLADVV-DFIIII 1490


>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
          Length = 2090

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 201  CATLWAINYPPICRFNHGYVKSKIRERTIVFIIIDLPDIVWKFRVII 341
            C +L    Y P+ RF H  + +K R  T V+ ++ L D+V  F +II
Sbjct: 1500 CLSLAQGTYRPLRRFFHDILHTKYRAATDVYALMFLADVV-DFIIII 1545


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,330,462
Number of Sequences: 237096
Number of extensions: 1421999
Number of successful extensions: 2170
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2170
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)