Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e08f
         (565 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    54   1e-09
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   3.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.6  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 53.6 bits (123), Expect = 1e-09
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
 Frame = +1

Query: 235 LAFLLYLKQIYCYFSKHEIKSITPLPILGNMGKIVF---KINHFVDDISQLYNKFPEERF 405
           LA   YL   + ++    +    P+P  G    ++       HFV DI   Y K+  E  
Sbjct: 16  LALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDI---YEKYKNEPM 72

Query: 406 VGRYEFVNPVIYIRDIEIVKRITIKDFEHFLDHRTIVNEETDPI 537
           VG Y   +P + + D E++K I I+DF  F +    V E T+P+
Sbjct: 73  VGLYATRSPFLLLNDPELIKDILIRDFSKFANRGLGVFERTEPL 116


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/33 (18%), Positives = 20/33 (60%)
 Frame = -2

Query: 402 SFFWKFVVQLRNIINKMVNLEDNLAHVAQYRKR 304
           S +W  ++Q+  +  ++ ++++     ++YRK+
Sbjct: 10  SLYWYLILQIALVYGEISDIDEFREMTSKYRKK 42


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 178 KQNRRKDIMIIIIWTL--AIGLAFLLYL 255
           K NRR  + I+++W +  AIG   +L L
Sbjct: 298 KNNRRVWLTILLVWAISAAIGSPIVLGL 325


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = +3

Query: 162 EIINYQTEQKKRYNDYHYMDISYRFGFLTVPEADIL 269
           EI+N++  +    N Y Y  +   F  L +   +++
Sbjct: 401 EILNFRKSEHNGTNGYQYQVVGKWFNSLDIRTEELI 436


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = +3

Query: 162 EIINYQTEQKKRYNDYHYMDISYRFGFLTVPEADIL 269
           EI+N++  +    N Y Y  +   F  L +   +++
Sbjct: 491 EILNFRKSEHNGTNGYQYQVVGKWFNSLDIRTEELI 526


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 372 RNIINKMVNLEDN 334
           RN+I+K +  EDN
Sbjct: 275 RNVIDKWIKTEDN 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,234
Number of Sequences: 438
Number of extensions: 2986
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)