Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e06r
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.50 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.50 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.1  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   6.1  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -1

Query: 644 LTPNGRESKKLMESINSNGSN 582
           LTP GR+ +K+++S++S  +N
Sbjct: 227 LTPQGRKEQKVLKSLHSFSNN 247


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -1

Query: 644 LTPNGRESKKLMESINSNGSN 582
           LTP GR+ +K+++S++S  +N
Sbjct: 227 LTPQGRKEQKVLKSLHSFSNN 247


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 544 KKAKLINFIQEYHRTTGLRPKVARR 470
           +K KLI+ +QEY     LRP +  +
Sbjct: 269 EKRKLIHLLQEYRCIFSLRPGLTHK 293


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 599 NSNGSNWFNYWGEN 558
           N+NG+N  N+W +N
Sbjct: 378 NNNGNNSNNHWRKN 391


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 363 TKLGELRRSPTSQNL 319
           T LG+L R PT  NL
Sbjct: 45  TVLGDLHRKPTYNNL 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,319
Number of Sequences: 336
Number of extensions: 3819
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)