Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e06r
         (761 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0085 - 9717360-9717390,9717478-9717603,9718600-9718666,971...    31   0.76 
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228...    30   2.3  
11_05_0058 + 18719852-18719929,18720032-18720889,18720969-187211...    29   5.3  
11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293...    28   7.1  
04_04_1397 - 33230416-33230742,33230852-33231007,33231130-332315...    28   7.1  
12_02_1260 - 27395754-27397499                                         28   9.3  

>11_03_0085 -
           9717360-9717390,9717478-9717603,9718600-9718666,
           9718770-9718831,9718904-9719094,9720133-9720268,
           9720760-9720851,9721231-9721413
          Length = 295

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -1

Query: 710 DGLYAISKNISIIQDYPKAGAILTPNGRESKKLMESI 600
           DGL+ I+ N+S+++      AILTPN  E K+L++ +
Sbjct: 147 DGLFLITNNLSLVEG--NLLAILTPNVYEYKRLVQKV 181


>10_08_0824 +
           20821724-20822137,20822457-20822543,20822729-20822829,
           20822917-20822967,20823616-20823790,20823878-20824192,
           20824504-20824707,20824799-20825314,20825400-20825609,
           20826092-20826280,20827254-20827405,20827685-20827837,
           20827925-20828006,20828086-20828475
          Length = 1012

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 471 ETRWWSRRLPIRLAGYILSLGVNKRCVPRRTTRTNFTKLG 352
           E RWW    P+RLA ++ ++ +N + +   T   +   LG
Sbjct: 124 ERRWWPGLAPVRLALFVGTMNINAQSLMVATLAKSLKNLG 163


>11_05_0058 +
           18719852-18719929,18720032-18720889,18720969-18721118,
           18722248-18722496,18722531-18722575,18722576-18722638
          Length = 480

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = -2

Query: 544 KKAKLINFIQEYHRTTGLRPKVARRDALVVKETSYQARWLHFII 413
           K    +N +  +H  TG++  + +++    K T Y  RW++F +
Sbjct: 82  KFVSCVNTVIRHHAGTGVKSFIIKKNLNNQKYTHYLDRWMYFAV 125


>11_04_0391 +
           17127309-17127449,17127886-17127950,17129209-17129305,
           17129729-17130193,17130505-17130528
          Length = 263

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 246 CRMNFFNHIRSHHASSVFFECLRITSSD*SGCGV 347
           C  NF +H R+ H +S  +ECL        GCGV
Sbjct: 84  CLENFEDHYRTRHTASCSYECLV------EGCGV 111


>04_04_1397 -
           33230416-33230742,33230852-33231007,33231130-33231543,
           33234177-33234307,33235076-33235202,33235709-33236209,
           33237624-33237935,33238690-33238719
          Length = 665

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +2

Query: 593 SNLSIPSTSSIRVRSVSKW--RLPLDNPE*W 679
           SN++ PS +++RVR+V +W  R+P      W
Sbjct: 292 SNVASPSVAAVRVRAVRRWPLRIPARTNREW 322


>12_02_1260 - 27395754-27397499
          Length = 581

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -1

Query: 404 TSDVCQGEQHGQISQSLASYA----AARLVRTCN 315
           +S  CQG  HGQ++  LA++A     A  +R CN
Sbjct: 136 SSSSCQGPTHGQLAALLAAFAFLVVGAGGIRPCN 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,864,357
Number of Sequences: 37544
Number of extensions: 371857
Number of successful extensions: 926
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)