Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e06r
         (761 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060665-1|AAL28213.1|  300|Drosophila melanogaster GH09035p pro...   103   4e-22
AE014296-3106|AAF49189.1|  300|Drosophila melanogaster CG10424-P...   103   4e-22
DQ486143-1|ABF50839.1| 1317|Drosophila melanogaster RhoGAP18B-PC...    29   6.9  
DQ486142-1|ABF50838.1|  752|Drosophila melanogaster RhoGAP18B-PD...    29   6.9  
DQ486141-1|ABF50837.1|  468|Drosophila melanogaster RhoGAP18B-PA...    29   6.9  
AY061332-1|AAL28880.1|  468|Drosophila melanogaster LD25711p pro...    29   6.9  
AE014298-2803|AAF48919.2|  468|Drosophila melanogaster CG7481-PA...    29   6.9  

>AY060665-1|AAL28213.1|  300|Drosophila melanogaster GH09035p
           protein.
          Length = 300

 Score =  103 bits (246), Expect = 4e-22
 Identities = 62/179 (34%), Positives = 101/179 (56%)
 Frame = -1

Query: 761 DIIESCKVLEKPIVIDADGLYAISKNISIIQDYPKAGAILTPNGRESKKLMESINSNGSN 582
           ++++ C   +KP+VIDADGL+ ++ N+++I   P    ILTPN  E ++L    +     
Sbjct: 127 NVLKLCMDTKKPVVIDADGLFLLNDNLNLICGQPNV--ILTPNVMEFQRLFGEDDQAARQ 184

Query: 581 WFNYWGENVSVLEKGETDKFHSRVPSYNWAXXXXXXXXXXXXXGDFLSGSLATFYHWALT 402
             +  G  V+VLEKG  DK +    +   +             GD LSGSLATF+ W+L 
Sbjct: 185 KMSLLGAGVTVLEKGANDKIYLPHCNEVHSMPSGGSGRRCGGQGDLLSGSLATFFSWSLQ 244

Query: 401 SDVCQGEQHGQISQSLASYAAARLVRTCNSQAFEKYGRSMMASDMIKEIHSAYKKVFED 225
           S    GE +  +   +A+ A++  V+  N+ AF+K+GRS++ASDM+ +I S ++  FE+
Sbjct: 245 S----GEPNPAL---VAACASSYFVKKLNAAAFQKFGRSLLASDMVNQIPSVFQTEFEN 296


>AE014296-3106|AAF49189.1|  300|Drosophila melanogaster CG10424-PA
           protein.
          Length = 300

 Score =  103 bits (246), Expect = 4e-22
 Identities = 62/179 (34%), Positives = 101/179 (56%)
 Frame = -1

Query: 761 DIIESCKVLEKPIVIDADGLYAISKNISIIQDYPKAGAILTPNGRESKKLMESINSNGSN 582
           ++++ C   +KP+VIDADGL+ ++ N+++I   P    ILTPN  E ++L    +     
Sbjct: 127 NVLKLCMDTKKPVVIDADGLFLLNDNLNLICGQPNV--ILTPNVMEFQRLFGEDDQAARQ 184

Query: 581 WFNYWGENVSVLEKGETDKFHSRVPSYNWAXXXXXXXXXXXXXGDFLSGSLATFYHWALT 402
             +  G  V+VLEKG  DK +    +   +             GD LSGSLATF+ W+L 
Sbjct: 185 KMSLLGAGVTVLEKGANDKIYLPHCNEVHSMPSGGSGRRCGGQGDLLSGSLATFFSWSLQ 244

Query: 401 SDVCQGEQHGQISQSLASYAAARLVRTCNSQAFEKYGRSMMASDMIKEIHSAYKKVFED 225
           S    GE +  +   +A+ A++  V+  N+ AF+K+GRS++ASDM+ +I S ++  FE+
Sbjct: 245 S----GEPNPAL---VAACASSYFVKKLNAAAFQKFGRSLLASDMVNQIPSVFQTEFEN 296


>DQ486143-1|ABF50839.1| 1317|Drosophila melanogaster RhoGAP18B-PC
            protein.
          Length = 1317

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 758  IIESCKVLEKPIVIDADGLYAISKNISIIQDYPK 657
            +++ C  +E+P  I+ DGLY  S N  ++ +  K
Sbjct: 1144 VVDVCAYIEQPECIEQDGLYRASGNKVLVDELRK 1177


>DQ486142-1|ABF50838.1|  752|Drosophila melanogaster RhoGAP18B-PD
           protein.
          Length = 752

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 758 IIESCKVLEKPIVIDADGLYAISKNISIIQDYPK 657
           +++ C  +E+P  I+ DGLY  S N  ++ +  K
Sbjct: 579 VVDVCAYIEQPECIEQDGLYRASGNKVLVDELRK 612


>DQ486141-1|ABF50837.1|  468|Drosophila melanogaster RhoGAP18B-PA
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 758 IIESCKVLEKPIVIDADGLYAISKNISIIQDYPK 657
           +++ C  +E+P  I+ DGLY  S N  ++ +  K
Sbjct: 295 VVDVCAYIEQPECIEQDGLYRASGNKVLVDELRK 328


>AY061332-1|AAL28880.1|  468|Drosophila melanogaster LD25711p
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 758 IIESCKVLEKPIVIDADGLYAISKNISIIQDYPK 657
           +++ C  +E+P  I+ DGLY  S N  ++ +  K
Sbjct: 295 VVDVCAYIEQPECIEQDGLYRASGNKVLVDELRK 328


>AE014298-2803|AAF48919.2|  468|Drosophila melanogaster CG7481-PA
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 758 IIESCKVLEKPIVIDADGLYAISKNISIIQDYPK 657
           +++ C  +E+P  I+ DGLY  S N  ++ +  K
Sbjct: 295 VVDVCAYIEQPECIEQDGLYRASGNKVLVDELRK 328


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,716,998
Number of Sequences: 53049
Number of extensions: 644980
Number of successful extensions: 1522
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)