Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e06r
         (761 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   5.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.4  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 593 NGSNWFNYWGENVSVLEKG-ETDKFHS 516
           N  ++F Y G N+ ++ K  ET +F S
Sbjct: 334 NSEHFFEYGGNNIEIIVKDPETLQFPS 360


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 746 CKVLEKPIVIDADGLYAISKNISIIQ 669
           CK++ + + I+ +GL A  +  S+IQ
Sbjct: 470 CKMILESMEIERNGLIASQRQNSVIQ 495


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -1

Query: 665  YPKAGAILTPNGRESKKLMESINSNGSNWFNYW 567
            +   G I  PNG +    ME +       FN+W
Sbjct: 1132 FTSPGGIPGPNGIKMPSFMEGMPHLPFTPFNFW 1164


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 736 WRSP*SSTPMAYTLF 692
           WR+P   TP  Y LF
Sbjct: 59  WRNPSMQTPTNYYLF 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,617
Number of Sequences: 438
Number of extensions: 4094
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)