Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e06f
         (587 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060665-1|AAL28213.1|  300|Drosophila melanogaster GH09035p pro...   106   3e-23
AE014296-3106|AAF49189.1|  300|Drosophila melanogaster CG10424-P...   106   3e-23

>AY060665-1|AAL28213.1|  300|Drosophila melanogaster GH09035p
           protein.
          Length = 300

 Score =  106 bits (254), Expect = 3e-23
 Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = +3

Query: 285 LKKLTSNIVPTL-NGKSKGDLGRIGIIGGSVEYTGAPYFSAIAAFKAGADIVYVITTEDA 461
           L  L   +VP L N K KG  GRIG+IGGS+EYTGAPYF+AI++ + GAD+ +V    +A
Sbjct: 14  LLALFKTVVPKLVNNKHKGQYGRIGVIGGSLEYTGAPYFAAISSIRVGADLAHVFCHSNA 73

Query: 462 APVIKIYSPDLIVYPFLNKKYA-SKISSLLPKMDAIVIGPGLG 587
           + +IK YSPDLIV+P L+   A  +I+  L ++  +VIGPGLG
Sbjct: 74  SAIIKSYSPDLIVHPVLDCVDAVERIAPWLERLHVVVIGPGLG 116


>AE014296-3106|AAF49189.1|  300|Drosophila melanogaster CG10424-PA
           protein.
          Length = 300

 Score =  106 bits (254), Expect = 3e-23
 Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = +3

Query: 285 LKKLTSNIVPTL-NGKSKGDLGRIGIIGGSVEYTGAPYFSAIAAFKAGADIVYVITTEDA 461
           L  L   +VP L N K KG  GRIG+IGGS+EYTGAPYF+AI++ + GAD+ +V    +A
Sbjct: 14  LLALFKTVVPKLVNNKHKGQYGRIGVIGGSLEYTGAPYFAAISSIRVGADLAHVFCHSNA 73

Query: 462 APVIKIYSPDLIVYPFLNKKYA-SKISSLLPKMDAIVIGPGLG 587
           + +IK YSPDLIV+P L+   A  +I+  L ++  +VIGPGLG
Sbjct: 74  SAIIKSYSPDLIVHPVLDCVDAVERIAPWLERLHVVVIGPGLG 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,993,789
Number of Sequences: 53049
Number of extensions: 382481
Number of successful extensions: 1007
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)