Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e05r
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         27   0.21 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 464 INSKNLPRRRSSRRAQGKQRDQQATTKKSFEVMIKRDIKHKP 339
           +NSK+LPR+ S  R +  Q   +   K   E   +R+  ++P
Sbjct: 194 LNSKSLPRQYSQSRGRHNQSRSKRQPKTGREDQTRRNPYYRP 235


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 268 FFKINSLIFDFCIISDTLAV*N*FL-CICYFFVTFVTFYSEKSILTVARLLIC 113
           FF ++ L+F  C+   TL +   FL CI YF+  F+ F        V  +L+C
Sbjct: 188 FFNMH-LLFLLCLDYFTLHLL--FLPCIYYFYSAFIIFTIHLLFYCVLIILLC 237



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = -1

Query: 292 CNHAYLIKFFKINSLIFDFCIISDTLAV*N*FLCICYFFVTFVTF 158
           C + +++  F +  + + +C            LCI +FF  F+ F
Sbjct: 132 CIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIF 176



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 196 LCICYFFVTFVTF 158
           LCI YF+  F+ F
Sbjct: 236 LCIYYFYYAFILF 248



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 246 YLIFVLFLTLWLYKISFFAFVIFLSH 169
           Y  F++ L ++ +   ++AF+IF  H
Sbjct: 104 YYAFIILLCVYYF---YYAFIIFTVH 126



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 196 LCICYFFVTFVTF 158
           LC+ YF+  F+ F
Sbjct: 111 LCVYYFYYAFIIF 123


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 128 CNCQNTFFGIKCHE 169
           C CQ  F G  CHE
Sbjct: 54  CQCQPGFTGKYCHE 67


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 279 TSLSFLK*IV*YLIFVLFLTLWLYKI 202
           + L  L  I+  ++FV F++ WLY +
Sbjct: 39  SKLLILYNIILQVLFVSFVSYWLYLV 64


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 279 TSLSFLK*IV*YLIFVLFLTLWLYKI 202
           + L  L  I+  ++FV F++ WLY +
Sbjct: 57  SKLLILYNIILQVLFVSFVSYWLYLV 82


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 635  HSSYMSSLVLVECWLSSQDSKPSLHWPDVDH 543
            H S  S  V V   L  Q+  P LH+   +H
Sbjct: 1215 HESCSSFYVCVNGHLVPQNCAPGLHYNPEEH 1245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,308
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)