Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e05r
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...   114   3e-27
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.3  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.7  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score =  114 bits (274), Expect = 3e-27
 Identities = 61/123 (49%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
 Frame = -2

Query: 753 PFGLNVQLNYRDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXX 574
           PFGLN+ LNYRD  GN + EAV+N+T+ I EV EGLDGETFFLYVF              
Sbjct: 160 PFGLNIALNYRDGRGNQFSEAVFNETVQITEVDEGLDGETFFLYVFLAAIVILLLVLGQQ 219

Query: 573 XXXXXXXXXXXXXXXXXVETGTAS--EVDYDWLPKEIVNQLKKSPK-----TPKQSPRAR 415
                            VETGTAS  +VDY+W+P E + QL+ SPK     +PKQSPR R
Sbjct: 220 FLGSYGKRKRPTAARKVVETGTASTKDVDYEWIPSETLKQLQNSPKGAPKSSPKQSPRQR 279

Query: 414 KAK 406
           KAK
Sbjct: 280 KAK 282


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = -3

Query: 428  RRAQGKQRDQQATTKKSFEVMIKRDIKHKPVVHTSVCEMTEIKIGLQS 285
            ++A+ +QR +    K+  E+M +    HK +V     EM + +  +Q+
Sbjct: 863  KQAEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEEMAKARREVQA 910


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -3

Query: 440 RRSSRRAQGKQRDQQATTKKSFEVMIKRDIKHKPVVHTSVCEMTE 306
           +R    A+  +  + A +K+ F      + +H P VH+  C  T+
Sbjct: 334 KRPPGEAENSRDQRMAKSKRKFSQQNCCEQQHLPHVHSEKCAGTQ 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,112
Number of Sequences: 2352
Number of extensions: 13780
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)