Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e05r
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p pro...   103   3e-22
AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-P...   103   3e-22

>AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p
           protein.
          Length = 302

 Score =  103 bits (246), Expect = 3e-22
 Identities = 64/143 (44%), Positives = 76/143 (53%), Gaps = 21/143 (14%)
 Frame = -2

Query: 753 PFGLNVQLNYRDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXX 574
           PFGLN+ L YRDA+G  Y EAV+N+T+ I EV EGLDGETFFLYV               
Sbjct: 160 PFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQ 219

Query: 573 XXXXXXXXXXXXXXXXXVETGTA--SEVDYDWLPKEIVNQLKKSP---KTPK-------- 433
                            +ETGTA  S +DYDW+P+E +  L+KSP   KTPK        
Sbjct: 220 YLLGSSGKRKRAAAKKVIETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKPTKP 279

Query: 432 --------QSPRARKAKRSAGDD 388
                   QSP+ RK KRSAGDD
Sbjct: 280 ASPKAASQQSPKQRKVKRSAGDD 302


>AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-PA
           protein.
          Length = 302

 Score =  103 bits (246), Expect = 3e-22
 Identities = 64/143 (44%), Positives = 76/143 (53%), Gaps = 21/143 (14%)
 Frame = -2

Query: 753 PFGLNVQLNYRDASGNAYQEAVYNQTLNIVEVSEGLDGETFFLYVFXXXXXXXXXXXXXX 574
           PFGLN+ L YRDA+G  Y EAV+N+T+ I EV EGLDGETFFLYV               
Sbjct: 160 PFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYVLLAGIVVLLLVIGQQ 219

Query: 573 XXXXXXXXXXXXXXXXXVETGTA--SEVDYDWLPKEIVNQLKKSP---KTPK-------- 433
                            +ETGTA  S +DYDW+P+E +  L+KSP   KTPK        
Sbjct: 220 YLLGSSGKRKRAAAKKVIETGTANDSTIDYDWVPQETLRALQKSPPKSKTPKTSPKPTKP 279

Query: 432 --------QSPRARKAKRSAGDD 388
                   QSP+ RK KRSAGDD
Sbjct: 280 ASPKAASQQSPKQRKVKRSAGDD 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,213,672
Number of Sequences: 53049
Number of extensions: 618995
Number of successful extensions: 2100
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)