Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e05f
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   1.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.8  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   3.8  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   3.8  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   3.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   5.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.7  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 16/85 (18%), Positives = 39/85 (45%)
 Frame = +3

Query: 225 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 404
           D D S V+S+ ++   +    P+  + +    ++   P+   V   N  +V+ + ++   
Sbjct: 165 DRDTSEVESTSNLQADM----PLERIIEAEKRVECNDPLVALVVNENNTTVNNICQATHK 220

Query: 405 SFRYLMDYTYYIQNFTALPYNREVK 479
               L+ +   + +FT+LP   +V+
Sbjct: 221 QLFQLVQWAKLVPHFTSLPLTDQVQ 245


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 5/26 (19%), Positives = 16/26 (61%)
 Frame = -2

Query: 410 ERCLHGFYYIVYGTLVDEAHKKFHWV 333
           +R +  +YY++     +  ++K++W+
Sbjct: 33  KRMMRSWYYLLTNLTYNNTNRKYYWL 58


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 319 IFKLVTQWNFLWASSTRVP*TM**NPW 399
           + +L + W++ W    +VP  +  N W
Sbjct: 303 VCELYSDWDYFWDDEQQVPHIVKGNQW 329


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 319 IFKLVTQWNFLWASSTRVP*TM**NPW 399
           + +L + W++ W    +VP  +  N W
Sbjct: 304 VCELYSDWDYFWDDEQQVPHIVKGNQW 330


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 319 IFKLVTQWNFLWASSTRVP*TM**NPW 399
           + +L + W++ W    +VP  +  N W
Sbjct: 304 VCELYSDWDYFWDDEQQVPHIVKGNQW 330


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 313 LSIFKLVTQWNFLWASSTRVP 375
           L++ KLV Q+   WA +T +P
Sbjct: 466 LNLRKLVDQFGAEWAETTIIP 486


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 66  KMKLIYFTFLIVPAALLC 119
           K+K I  TF+IV   +LC
Sbjct: 246 KVKTIKITFVIVSVFILC 263


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 289 LCLAWVT*LSIFKLVTQWNFLWASS 363
           LC  W+T L +F ++  +    A+S
Sbjct: 285 LCALWITTLLLFTILLAYGCAGATS 309


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 84  FTFLIVPAALLCLGSGNI 137
           F FLIV    LCL  G +
Sbjct: 326 FGFLIVRTVCLCLFGGKV 343


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 84  FTFLIVPAALLCLGSGNI 137
           F FLIV    LCL  G +
Sbjct: 326 FGFLIVRTVCLCLFGGKV 343


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 60  STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 90


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 424 TTHTTFRTSPRCLITEKLSQNRKPPLPIPSS 516
           +T +T   SP+ L T        PPL  PS+
Sbjct: 104 STSSTGVASPQDLSTNGAPPRSTPPLSTPSN 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,346
Number of Sequences: 336
Number of extensions: 3167
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)