Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12e02r
         (725 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0E7D1 Cluster: Chromosome undetermined scaffold_81, wh...    34   3.1  
UniRef50_A5KEC9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_A0E7D1 Cluster: Chromosome undetermined scaffold_81, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_81,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 928

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  SHKYEYTNKCFKSK*TILIIFNKLNVHVDRILVSNDSLNIFQCTYKRSKY*QQLL*QF-N 188
           SH Y    K F  + T++   N+L  H D  + SND++   +C +K+ K    LL Q  N
Sbjct: 54  SHYYGEIKKLFSDQPTVIDNVNRLFYH-DARIKSNDTIQQLECLFKQDKQRINLLEQTKN 112

Query: 189 MKYLGTLSSKNKPDTL 236
           +   G L  + + D +
Sbjct: 113 LILKGNLDQQQQLDLI 128


>UniRef50_A5KEC9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 460

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -3

Query: 384 FINLSNIPNKPKKVVNSFFCLCKIL 310
           FINLS +PN P++++N F+ + K L
Sbjct: 375 FINLSFVPNIPEEIINDFYAIIKRL 399


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,699,476
Number of Sequences: 1657284
Number of extensions: 10744964
Number of successful extensions: 22981
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22980
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)