Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12e01f
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 54 1e-07
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 54 1e-07
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 52 4e-07
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 52 4e-07
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 49 3e-06
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 49 3e-06
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 49 3e-06
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 49 3e-06
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 49 3e-06
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 49 3e-06
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 46 2e-05
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 46 2e-05
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 32 0.26
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 32 0.26
Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 28 5.6
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 27 7.4
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 9.8
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQ 342
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 343 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWA 516
+ D T + N+++V+ Y + + T L+++ ++++F + AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 517 DEQTQVHIKTPVSEDKIDPATA 582
+ T IK + D + A A
Sbjct: 130 ENHTNGKIKDLIPADSANNAFA 151
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQ 342
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 343 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWA 516
+ D T + N+++V+ Y + + T L+++ ++++F + AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 517 DEQTQVHIKTPVSEDKIDPATA 582
+ T IK + D + A A
Sbjct: 130 ENHTNGKIKDLIPADSANNAFA 151
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 51.6 bits (118), Expect = 4e-07
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 154 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQES--SHTY 327
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 328 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADII 504
+ + VAN I+ + + + + L+ + +NF D + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 505 NRWADEQTQVHIKTPVSEDKI 567
N + E T+ HIK ++ D I
Sbjct: 139 NNFVSENTKGHIKKIINPDSI 159
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 51.6 bits (118), Expect = 4e-07
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 154 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQES--SHTY 327
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 328 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADII 504
+ + VAN I+ + + + + L+ + +NF D + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 505 NRWADEQTQVHIKTPVSEDKI 567
N + E T+ HIK ++ D I
Sbjct: 139 NNFVSENTKGHIKKIINPDSI 159
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQVHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKID 570
D I+
Sbjct: 148 DSIN 151
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQVHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKID 570
D I+
Sbjct: 148 DSIN 151
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQVHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKID 570
D I+
Sbjct: 148 DSIN 151
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQVHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKID 570
D I+
Sbjct: 148 DSIN 151
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQVHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKID 570
D I+
Sbjct: 148 DSIN 151
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQVHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKID 570
D I+
Sbjct: 148 DSIN 151
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Frame = +1
Query: 190 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKF 369
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 370 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWADEQTQVHI 540
+ V ANK+Y+ + + F TA + ++ +++ P A IN + + T I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139
Query: 541 KTPVSEDKIDPATAV 585
K ++D I A A+
Sbjct: 140 KNIATQDSIKDAIAL 154
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Frame = +1
Query: 190 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKF 369
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 370 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWADEQTQVHI 540
+ V ANK+Y+ + + F TA + ++ +++ P A IN + + T I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139
Query: 541 KTPVSEDKIDPATAV 585
K ++D I A A+
Sbjct: 140 KNIATQDSIKDAIAL 154
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.26
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESSHTYGL 333
LK + ++ + SP+ + L L SLYE+ G +++ +I + L + + +H +
Sbjct: 14 LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 72
Query: 334 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFGDPKNAADIIN 507
A + DP+ + + N I + K + L+ EV + + + K IN
Sbjct: 73 STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 131
Query: 508 RWADEQTQVHIK---TPVSEDK 564
+ E T HIK T +S DK
Sbjct: 132 KLIRENTDGHIKKINTKISIDK 153
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 32.3 bits (70), Expect = 0.26
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESSHTYGL 333
LK + ++ + SP+ + L L SLYE+ G +++ +I + L + + +H +
Sbjct: 13 LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 71
Query: 334 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFGDPKNAADIIN 507
A + DP+ + + N I + K + L+ EV + + + K IN
Sbjct: 72 STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 130
Query: 508 RWADEQTQVHIK---TPVSEDK 564
+ E T HIK T +S DK
Sbjct: 131 KLIRENTDGHIKKINTKISIDK 152
>Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical
protein C04B4.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.8
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
Frame = +1
Query: 49 RLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVML 228
+LLL V + G + + H + I KES +L D +S +G +
Sbjct: 137 QLLLSVLVYTGARHIDIIAHSMGVSIARAIIQGGKFTSEKESCDLGSD---FSSLIGTFI 193
Query: 229 LLSLYESG-----AG----AQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
+S G AG A KE IR+I ES ++ L +Y+ KFLT
Sbjct: 194 AISSANYGMCSCEAGTAFPACDKEVIRKINPLENQLESKKSF--LQTKYS----KFLTKL 247
Query: 382 NKIYVSDQYKLADAFSRTANLFRSEVDNINFGDPKNAADIINRWADEQTQVHIKT 546
NK++ + +A +S+ +F N+ +G + N W + H++T
Sbjct: 248 NKVHKKEAEFIASIWSKDDEVFLK--GNLVWGKQTSLVPGSNIWKEYPQLTHMET 300
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 5.6
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = +2
Query: 377 SPIKYTFPTSISWPTRSPGQRICSEAKWTT---LTLEIQRMPLISSTVGRTNRLKYT*RL 547
SP P+S P S + I T TL I R SSTV + T L
Sbjct: 960 SPPPPPLPSSTPPPVSSEHEEINVRQSSTLSGGYTLSIDRFYSSSSTVSSRKQFNETRDL 1019
Query: 548 LSAKTKLTPP 577
LS KL+PP
Sbjct: 1020 LSKSLKLSPP 1029
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -2
Query: 584 TAVAGSILSSLTGVFMCT*VCSSAQRLMISAAFFGSPKLMLSTSLLNRFAVLENASANLY 405
T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 81 TSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFASTI 135
Query: 404 WSETYILLATVKNFG 360
W E Y+L + G
Sbjct: 136 W-ELYLLFGVLGGIG 149
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -2
Query: 584 TAVAGSILSSLTGVFMCT*VCSSAQRLMISAAFFGSPKLMLSTSLLNRFAVLENASANLY 405
T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 81 TSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFASTI 135
Query: 404 WSETYILLATVKNFG 360
W E Y+L + G
Sbjct: 136 W-ELYLLFGVLGGIG 149
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 37 TVMDRLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 216
T D+ LV + FG+ FS RLG+ ++K L+ + N+A KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical
protein ZK512.5 protein.
Length = 1232
Score = 27.1 bits (57), Expect = 9.8
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 244 ESGAGAQSKEEIREILGGG---EAQESSHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKL 414
ESG+ ++KE + L GG EA ES+ T GL YA+ +T+ +++ +D K+
Sbjct: 521 ESGSKFEAKERFNKYLLGGHINEAVESAITDGL----YAD----AMTLIRRLHPNDAKKI 572
Query: 415 ADAFSRTANL 444
+ +R NL
Sbjct: 573 EEIEARFMNL 582
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.1 bits (57), Expect = 9.8
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +2
Query: 236 PCTSLEPVHSPRKRS----GKSLGEGRLKSHHTHTDY*ISVTQNSTRNS*LSPIKYTFPT 403
P T+L+P SP K S S + S T + +T + SP T PT
Sbjct: 167 PTTTLKPTTSPEKHSTTEEATSPSQNETTSVTTQNPTTSNQKNETTDEATSSPPTTTTPT 226
Query: 404 SISWPTRSP-----GQRICSEAKWTTLTLEIQRMPLISSTVGRTNRLKYT*RLLSAKTKL 568
+ PT SP + S ++ TT + Q P S+ T + T SAKT +
Sbjct: 227 TTLKPTTSPQKPDSTEEATSPSQSTTTPVATQN-PTTSNQKNETTD-EATSSPQSAKTPV 284
Query: 569 TPP 577
T P
Sbjct: 285 TNP 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.133 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,140,316
Number of Sequences: 27780
Number of extensions: 298474
Number of successful extensions: 788
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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