Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d24r
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY971957-1|AAY46815.1| 1389|Homo sapiens abnormal spindle-like m...    30   7.7  
AY971955-1|AAY46813.1| 1062|Homo sapiens abnormal spindle-like m...    30   7.7  
AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like m...    30   7.7  
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ...    30   7.7  
AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.    30   7.7  

>AY971957-1|AAY46815.1| 1389|Homo sapiens abnormal spindle-like
           microcephaly associated splice variant 2 protein.
          Length = 1389

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 118 YIHIIFTVMSVRKRYLNSLLPSKDADTCVSSYAL-LCT*KELSISNGLNTIIRMFYQKRT 294
           Y+H+  TV+S+++RY         A  C+ SY       K++   +   T+I+ FY+   
Sbjct: 630 YLHLRATVVSIQRRYRKLTAVRTQAVICIQSYYRGFKVRKDIQNMHRAATLIQSFYRMHR 689

Query: 295 IRLFFQ 312
            ++ ++
Sbjct: 690 AKVDYE 695


>AY971955-1|AAY46813.1| 1062|Homo sapiens abnormal spindle-like
           microcephaly associated splice variant 3 protein.
          Length = 1062

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 118 YIHIIFTVMSVRKRYLNSLLPSKDADTCVSSYAL-LCT*KELSISNGLNTIIRMFYQKRT 294
           Y+H+  TV+S+++RY         A  C+ SY       K++   +   T+I+ FY+   
Sbjct: 229 YLHLRATVVSIQRRYRKLTAVRTQAVICIQSYYRGFKVRKDIQNMHRAATLIQSFYRMHR 288

Query: 295 IRLFFQ 312
            ++ ++
Sbjct: 289 AKVDYE 294


>AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like
            microcephaly-associated protein protein.
          Length = 3477

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 118  YIHIIFTVMSVRKRYLNSLLPSKDADTCVSSYAL-LCT*KELSISNGLNTIIRMFYQKRT 294
            Y+H+  TV+S+++RY         A  C+ SY       K++   +   T+I+ FY+   
Sbjct: 2644 YLHLRATVVSIQRRYRKLTAVRTQAVICIQSYYRGFKVRKDIQNMHRAATLIQSFYRMHR 2703

Query: 295  IRLFFQ 312
             ++ ++
Sbjct: 2704 AKVDYE 2709


>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
            homolog, microcephaly associated (Drosophila) protein.
          Length = 3477

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 118  YIHIIFTVMSVRKRYLNSLLPSKDADTCVSSYAL-LCT*KELSISNGLNTIIRMFYQKRT 294
            Y+H+  TV+S+++RY         A  C+ SY       K++   +   T+I+ FY+   
Sbjct: 2644 YLHLRATVVSIQRRYRKLTAVRTQAVICIQSYYRGFKVRKDIQNMHRAATLIQSFYRMHR 2703

Query: 295  IRLFFQ 312
             ++ ++
Sbjct: 2704 AKVDYE 2709


>AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.
          Length = 3477

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 118  YIHIIFTVMSVRKRYLNSLLPSKDADTCVSSYAL-LCT*KELSISNGLNTIIRMFYQKRT 294
            Y+H+  TV+S+++RY         A  C+ SY       K++   +   T+I+ FY+   
Sbjct: 2644 YLHLRATVVSIQRRYRKLTAVRTQAVICIQSYYRGFKVRKDIQNMHRAATLIQSFYRMHR 2703

Query: 295  IRLFFQ 312
             ++ ++
Sbjct: 2704 AKVDYE 2709


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,556,116
Number of Sequences: 237096
Number of extensions: 1799913
Number of successful extensions: 4357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4357
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)