Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d24f
(621 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein... 31 0.022
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 28 0.21
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 1.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 25 1.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 1.5
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 25 1.5
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 1.9
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 2.6
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 3.4
AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-... 24 4.5
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 5.9
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 5.9
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 5.9
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 7.8
>AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein
protein.
Length = 178
Score = 31.5 bits (68), Expect = 0.022
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 26 TISAEIVC-SFVLRILVVAESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATK 202
T+ ++C +FV L + E + ++Q +RY + T A ++ +T ++
Sbjct: 27 TVVVVLLCLTFVADALTIQEL--RAQIAQQRIQQRYGVTVATTSAATTTAATTSAATTSE 84
Query: 203 SITTAVAATTESPAS 247
+ TTA A+TT++ S
Sbjct: 85 ATTTAAASTTQASDS 99
Score = 29.1 bits (62), Expect = 0.12
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +2
Query: 20 CVTISAEIVCSFVLRILVVAESVKSR-------KRSKQSTSERYSTESSVDPTTTAAGAK 178
C+T A+ + LR + + ++ R + +T+ S ++ + TTTAA +
Sbjct: 34 CLTFVADALTIQELRAQIAQQRIQQRYGVTVATTSAATTTAATTSAATTSEATTTAAAST 93
Query: 179 SNYSTATKSITTAVAATTESPASFATAE 262
+ S + + TTA A TT + ++++
Sbjct: 94 TQASDSDNTTTTAEATTTTEAQTTSSSD 121
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 28.3 bits (60), Expect = 0.21
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 83 SVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 262
SV S ++ ST+ +T + + TTT + +T T+ TT ATT A+ TAE
Sbjct: 127 SVASPTTAEASTTTEAATTTQ-EATTTEEATTTEEATTTEKATTTEEATTTEEAT-TTAE 184
Score = 26.6 bits (56), Expect = 0.64
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 101 RSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 247
R ST+ T S PTT A + +T T+ TT ATT A+
Sbjct: 115 RPTTSTAAPEGT-SVASPTTAEASTTTEAATTTQEATTTEEATTTEEAT 162
Score = 25.4 bits (53), Expect = 1.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 104 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTE 235
++++T+ +T + TT A +T ++ TTA A TTE
Sbjct: 146 TQEATTTEEATTTEEATTTEKATTTEEATTTEEATTTAEATTTE 189
Score = 25.0 bits (52), Expect = 1.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 247
+T E +TE + TTT + +T T+ TT ATT + A+
Sbjct: 145 TTQEATTTEEA---TTTEEATTTEKATTTEEATTTEEATTTAEAT 186
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.4 bits (53), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 131 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 256
+T S+ TTT + +T T ++ T ATT +PAS T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTT 204
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 247
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 131 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 256
+T S+ TTT + +T T ++ T ATT +PAS T
Sbjct: 162 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTT 203
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 247
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 279
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 131 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 256
+T S+ TTT + +T T ++ T ATT +PAS T
Sbjct: 162 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTT 203
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 247
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 279
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 25.4 bits (53), Expect = 1.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 113 STSERYSTESSVDPTTT---AAGAKSNYSTATKSITTAVAATTESPAS 247
+T+ +T ++V PTTT A G + + A+ +TT + T +P+S
Sbjct: 40 TTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSS 87
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTA-TKSITTAVAATTESPAS 247
+T+ +S + PTTT ++ +T T TTA TT P S
Sbjct: 235 TTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYPPTTNEPPS 280
Score = 23.4 bits (48), Expect = 5.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 131 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 256
+T S+ TTT + +T T ++ T ATT +PA T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTT 204
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 24.6 bits (51), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 190 NSNKVNYNSSCSNNRISSKLCNSRT 264
N+N N +SSC NN +SS N+ T
Sbjct: 157 NNNNSNSSSSC-NNHVSSNTNNNGT 180
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.2 bits (50), Expect = 3.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYST 193
ST YS++S+ TTT + + S++ST
Sbjct: 468 STYCTYSSDSTTTTTTTKSASTSSHST 494
>AY805323-1|AAV66543.1| 459|Anopheles gambiae beta
subunit-GABA-A-gated chloride channelprotein.
Length = 459
Score = 23.8 bits (49), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 457 TKLLNQYSSNNKLYKNTFKLFSNNRYRQ 540
T LNQY + +L N F L+ +N+ Q
Sbjct: 45 TMYLNQYWKDERLAFNAFALWGDNQKDQ 72
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 5.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 131 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 256
+T S+ TTT + +T T ++ T ATT +PA T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTT 204
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 247
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 247
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.4 bits (48), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 247
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTSEPPS 280
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 7.8
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 116 TSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 247
T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 236 TTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,769
Number of Sequences: 2352
Number of extensions: 3543
Number of successful extensions: 48
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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