Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d21f
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical pr...    93   2e-19
U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical pr...    38   0.004
Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z46266-15|CAA86420.1|  956|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z46266-9|CAO78710.1|  790|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z46266-8|CAJ30221.1|  826|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z46266-4|CAA86414.2|  787|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37979-6|CAA86038.1|  956|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.    27   7.9  

>Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical
           protein M153.1 protein.
          Length = 279

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 53/137 (38%), Positives = 73/137 (53%)
 Frame = +3

Query: 195 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALFENXXXX 374
           MKIGFIG G++A ALA G I++G    D I AS    D       + LG     +N    
Sbjct: 1   MKIGFIGAGKMAQALARGLINSGRITADNIIASSPKRDEVFLDQCKALGLNTTHDNAEVV 60

Query: 375 XXXXXXXXXXXXXXXXPALKEIKNLPSAKNKLFISVAMGITIATVESNLPSEARVIRVMP 554
                               EI    S K  L +S+A+GITI  +ES LP+++RV+RVMP
Sbjct: 61  QKSDVVFLAVKPVHVSKVASEIAPALS-KEHLVVSIALGITIRNIESLLPTKSRVVRVMP 119

Query: 555 NTPALVKEGAAAFSRGT 605
           NTP++V+ GA+AF+ G+
Sbjct: 120 NTPSVVRAGASAFAMGS 136


>U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical
           protein F55G1.9 protein.
          Length = 299

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
 Frame = +3

Query: 189 EAMKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALFENXX 368
           E++   FIGGG +A A+  G  + G      I          SA+ ++ LG   +F N  
Sbjct: 13  ESVPFVFIGGGNMAAAIIKGCQNKGFTPKSNIVIGVQTE--KSAEKWRQLGYKNVFTNTL 70

Query: 369 XXXXXXXXXXXXXXXXXXPALKEIKNLP-SAKNKLFISVAMGITIATVESNLP---SEAR 536
                                + + + P +++ +  ISV  G+ +  + + LP       
Sbjct: 71  EMLERYSTAIYVICVKPQVFEEVVSSWPVNSRPEFIISVMAGVPLKVLNAKLPFVSGNTT 130

Query: 537 VIRVMPNTPALVKEGAA 587
           ++R+MPN  + +  GA+
Sbjct: 131 IVRLMPNVASSIGAGAS 147


>Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical
           protein B0491.5 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 426 ALKEIKNLPSAKNKLFISVAMGITIATVESNL 521
           A   I++     N  F SVA+G T+AT++SN+
Sbjct: 235 AASSIRHKDDVHNHWFASVAVGSTVATMKSNV 266


>Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical
           protein ZK899.8h protein.
          Length = 1088

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 915 SSGYAIPAEPKEIVYQKRASPPPYDP 940


>Z46266-15|CAA86420.1|  956|Caenorhabditis elegans Hypothetical
           protein ZK899.8f protein.
          Length = 956

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 783 SSGYAIPAEPKEIVYQKRASPPPYDP 808


>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
           protein ZK899.8e protein.
          Length = 1048

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 875 SSGYAIPAEPKEIVYQKRASPPPYDP 900


>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
            protein ZK899.8d protein.
          Length = 1137

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 964  SSGYAIPAEPKEIVYQKRASPPPYDP 989


>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
            protein ZK899.8c protein.
          Length = 1259

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 1086 SSGYAIPAEPKEIVYQKRASPPPYDP 1111


>Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical
            protein ZK899.8b protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 997  SSGYAIPAEPKEIVYQKRASPPPYDP 1022


>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
            protein ZK899.8a protein.
          Length = 1207

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 1034 SSGYAIPAEPKEIVYQKRASPPPYDP 1059


>Z46266-9|CAO78710.1|  790|Caenorhabditis elegans Hypothetical
           protein ZK899.8j protein.
          Length = 790

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 617 SSGYAIPAEPKEIVYQKRASPPPYDP 642


>Z46266-8|CAJ30221.1|  826|Caenorhabditis elegans Hypothetical
           protein ZK899.8i protein.
          Length = 826

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 653 SSGYAIPAEPKEIVYQKRASPPPYDP 678


>Z46266-4|CAA86414.2|  787|Caenorhabditis elegans Hypothetical
           protein ZK899.8g protein.
          Length = 787

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 614 SSGYAIPAEPKEIVYQKRASPPPYDP 639


>Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical
           protein ZK899.8h protein.
          Length = 1088

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 915 SSGYAIPAEPKEIVYQKRASPPPYDP 940


>Z37979-6|CAA86038.1|  956|Caenorhabditis elegans Hypothetical
           protein ZK899.8f protein.
          Length = 956

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 783 SSGYAIPAEPKEIVYQKRASPPPYDP 808


>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
           protein ZK899.8e protein.
          Length = 1048

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 SSGFARPAEIKPFAKANASLPPPINP 203
           SSG+A PAE K       + PPP +P
Sbjct: 875 SSGYAIPAEPKEIVYQKRASPPPYDP 900


>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical protein
            ZK899.8d protein.
          Length = 1137

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 964  SSGYAIPAEPKEIVYQKRASPPPYDP 989


>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical protein
            ZK899.8c protein.
          Length = 1259

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 1086 SSGYAIPAEPKEIVYQKRASPPPYDP 1111


>Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical protein
            ZK899.8b protein.
          Length = 1170

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 997  SSGYAIPAEPKEIVYQKRASPPPYDP 1022


>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical protein
            ZK899.8a protein.
          Length = 1207

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 1034 SSGYAIPAEPKEIVYQKRASPPPYDP 1059


>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical protein
            ZK899.8a protein.
          Length = 1207

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 1034 SSGYAIPAEPKEIVYQKRASPPPYDP 1059


>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
          Length = 1120

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 280  SSGFARPAEIKPFAKANASLPPPINP 203
            SSG+A PAE K       + PPP +P
Sbjct: 964  SSGYAIPAEPKEIVYQKRASPPPYDP 989


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,875,995
Number of Sequences: 27780
Number of extensions: 265235
Number of successful extensions: 606
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)