Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d17f
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   5.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.1  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 381 LSSNNPALEPECCYQ 337
           L  N+ ALEPE C+Q
Sbjct: 571 LGINSDALEPEWCWQ 585


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 248 SPIGDQYLHPH 280
           SPI ++++HPH
Sbjct: 93  SPIDEKFVHPH 103


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 393 QDNTALVQQGSYTYTAPDGQVITVEY 470
           QD+T +V++ + T      QV+ +EY
Sbjct: 177 QDDTPMVRRAAATKLGELAQVVELEY 202


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 171 EQNFNNYQPQQQE 209
           ++NF NY+P+  E
Sbjct: 226 QENFENYEPKSPE 238


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 261 TSTYIPIIRFDKEQGTDGSYKTSYETGNN 347
           +S  I I+ + KE GTD      +  G+N
Sbjct: 213 SSHVITILDWTKEDGTDKFMSHIHNDGDN 241


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 211 IDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 324
           +D    ++TS  K  +RPV  S + + + + +   ATK
Sbjct: 228 LDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATK 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,572
Number of Sequences: 336
Number of extensions: 3026
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)