Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d17f
(538 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 31 0.45
SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_28850| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 30 1.4
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 29 3.2
SB_7869| Best HMM Match : DUF947 (HMM E-Value=6.3) 28 5.6
SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10) 28 5.6
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 28 5.6
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 27 7.3
SB_26841| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_38053| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_33412| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 7.3
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_8812| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_25754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 31.5 bits (68), Expect = 0.45
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +1
Query: 154 KTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVS 291
+T HL++ + TIS + + +D Q++ SD++S VPTSP++ S
Sbjct: 379 ETIRHLSEQNETISNTYKGMD-QSELEESDVRSQSGSVPTSPVTPS 423
>SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 141 EQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLE 260
+QQ++ Q +Q QPQQQ+ +Q +P + QL+
Sbjct: 103 QQQLQQQQQQQQQLQQQQPQQQQQQQQQPQQQQPQQQQLQ 142
>SB_28850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 126 VSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPII 284
+SL+P + ++ L NF +Y QQ R + P++ QL TST I ++
Sbjct: 158 ISLQPLKGIKSDKDLVSNFKSY---QQSARSSSPINVATNSKQLTTSTPIKVM 207
>SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 141 EQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLE 260
+QQ++ Q +Q QPQQQ+ +Q +P + QL+
Sbjct: 102 QQQLQQQQQQQQQLQQQQPQQQQQQQQQPQQQQPQQQQLQ 141
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +1
Query: 154 KTNSHLNKTSTTIS---PSNRNIDKQNQSMTSD-LKSNWRPVPTSPLSVSIRNKEPTEAT 321
K + KT I+ P+ + +Q QS T++ L +N + ++I N PT+
Sbjct: 737 KNTQQITKTLININNNNPTQQQKQQQQQSTTTNTLNNNKNTQQITKTLININNNNPTQQQ 796
Query: 322 KLHMKLVTTFRLKSRVI*RQSVITKTTLLWSN 417
+ + + TT + S K WSN
Sbjct: 797 QPYSSMQTTILFRQDYYIYYSNCNKIICEWSN 828
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 136 SQNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRN 300
S NS W+TN T++SPS N NQS + N P + + S RN
Sbjct: 513 SPNSSWQTNQSGGLALTSLSPS-LNRPSSNQSPSMSRYGNHSPTKRAREAESKRN 566
>SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 306 TDGSYK--TSYETGNNIQAQEQGYLKTVGDNQDNTALVQ 416
TDGS + TSYE+ + I Q+ +NQD +AL+Q
Sbjct: 282 TDGSMRENTSYESCHTISGQDAARSAPPNNNQDYSALMQ 320
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.1 bits (62), Expect = 2.4
Identities = 27/102 (26%), Positives = 40/102 (39%)
Frame = +3
Query: 114 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFD 293
P+ K S KP+ Q D+ + +PQ Q+ + A+P +L+
Sbjct: 25 PKTKTS-KPQDQ--DKQAARPRQASRKPQDQDKQAARPRQASLKTSKLQDQNNQAARPRQ 81
Query: 294 KEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQ 419
Q S KTS N Q +T +QDNT V+Q
Sbjct: 82 ARQARQASLKTSKLQDQNKQDARPASRRTKPQDQDNTRQVRQ 123
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 117 QRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQ 254
QR S P Q P + + QPQQQ+ +Q+ D FRP+ Q
Sbjct: 673 QRGASYPPRMPGMQQTPSQYGYQ--QPQQQQQQQS--FDQFRPQFQ 714
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 136 SQNSKWKTNSHLNKTSTTISPSNRNIDK--QNQSMTSDLKSNWRPVPTSPLSVSIRNKEP 309
++N+K KT + +KT+ + N DK +N++ T + K+ RP+ P + + R P
Sbjct: 499 TKNNKDKTKENKDKTNENKDKTKENKDKTKENKNKTKENKTANRPLTPLPATTANRLLPP 558
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -3
Query: 533 RYRGRGRDVVTGNSETELVSGVLDGNDLTIRGCVCIGSLLDQSSVVLVITDCLQITLLLS 354
R R RGR + + T + +L +I V GS+ +++ T+ LQ + + S
Sbjct: 773 RARHRGRRAILPATPTPTETSMLPTQVKSILTTVLTGSMTLMPTIIQNSTEVLQSSAVAS 832
Query: 353 LNVVT 339
LNV T
Sbjct: 833 LNVTT 837
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 142 NSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNW-RPVPTSPLSV-SIRNKE 306
+ KW N ++ + SN NI N S+ KS + R PT P SV S KE
Sbjct: 241 HDKWSENGEDRNSTGKTNSSNENITVSNSVRMSEGKSVFKRNRPTEPASVPSTETKE 297
>SB_7869| Best HMM Match : DUF947 (HMM E-Value=6.3)
Length = 408
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 136 SQNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSP 279
S ++ ++ SHL + ST + + R + + D++ P P+SP
Sbjct: 148 SYSTAGRSESHLTQQSTPLFEATRYVPRHEAEDPEDIEMQDAPCPSSP 195
>SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)
Length = 798
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/43 (23%), Positives = 26/43 (60%)
Frame = +1
Query: 136 SQNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRP 264
+ N + K + N+T TT+ P+ ++ +++ +++ ++S RP
Sbjct: 326 TNNCRTKHEAFSNQTQTTVEPNTKHYRTKHKRLSAQIRSIVRP 368
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 172 NKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPT 312
N ++ SPS++ + + D KSN R + PL ++++++ P+
Sbjct: 664 NDQTSEQSPSSKTEPFHEKKPSLDYKSNLRDESSDPLKINLQDERPS 710
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 130 R*SQNSKWKTNSHLN-KTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKE 306
R S N++ N KT + +P N+ I++ + + N P+ P+S ++ K
Sbjct: 856 RKSSNARAAAQFKFNGKTKASRTPPNQPIERSHSMQNIPIAPNTEPIRRRPVSTAVPYKI 915
Query: 307 P-TEATKLHM 333
P K+H+
Sbjct: 916 PQVPDHKIHL 925
>SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.5 bits (58), Expect = 7.3
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Frame = +3
Query: 114 PQRKVSLKPEQQVEDQLPL----EQNFNNYQPQQ-QEYRQAKPVDDFRPKVQLETSTYIP 278
PQ++ +P+QQ N NN Q QQ Q+ +Q +P T+T
Sbjct: 45 PQQQQQQQPQQQATTTTTTTTSNNSNHNNKQQQQPQQQQQQQPQQQQATTTTATTTTATT 104
Query: 279 IIRFDKEQGTDGSYKTSYETGNNIQAQEQ 365
+ ++ S N Q Q+Q
Sbjct: 105 TTTTTTSNNNNSNHNNSNHNNNKQQQQQQ 133
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 244 LKSNWRPVPTSPLSVSIRNKEPTEA 318
+K + +P+P SP S+ + +EP EA
Sbjct: 2212 VKKDKQPIPGSPFSILVEAEEPIEA 2236
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 142 NSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTS 276
N T S N+T +T SPSN I + S S P PT+
Sbjct: 337 NETISTESPSNETISTESPSNEKISTEAPWYASSTMSPAEPEPTN 381
>SB_26841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 141 EQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRP-KVQ 254
EQQ + +P Q + YQ QQQ+ Q PV F P KVQ
Sbjct: 310 EQQQQQHIPRPQ-LHEYQQQQQQ--QRDPVRHFEPLKVQ 345
>SB_38053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = -2
Query: 435 CMYRIPVGPEQCCL-GYHRLSSN--NPALEP 352
C++ PV P++C L G +RL SN P L P
Sbjct: 60 CVHEPPVQPDRCALSGNYRLESNPGRPDLSP 90
>SB_33412| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 852
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 222 KPVDDFRPKVQLETSTYIPIIRFDKEQGTDGSYK-TSYETGNNIQAQEQGYLKTVGDNQD 398
K + DF V ++Y +RF+K Q DG+Y +++ N E + GD D
Sbjct: 406 KTLIDFLRNVTFPDASYGWPVRFNKNQEMDGNYSIMNFQYQNGKWVYENVGSWSWGDESD 465
Query: 399 NTAL 410
N +
Sbjct: 466 NVRM 469
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 KTNSHLNKTSTT--ISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 324
KT + + KT+ + + +N+D N LKS P T P ++ + P + K
Sbjct: 383 KTTTAMKKTTVKEETTTAGKNVDSINTPKAKTLKSETMPTVTPPTKQTLPSTSPGDREK 441
>SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1951
Score = 27.1 bits (57), Expect = 9.7
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +3
Query: 117 QRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDK 296
+RK+ + Q Q LEQ+ + + Q+ EY Q K +D K++ E + F+K
Sbjct: 586 KRKLRELQKAQKPLQELLEQHKKDLEQQRYEYEQQK--EDLEAKLRNEQLQLLKSFEFEK 643
Query: 297 EQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQD 398
+ T+ YK + N + + Q L + +N +
Sbjct: 644 -RDTEKFYKNLLD---NREVEFQNELNQLKNNHE 673
>SB_8812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 114 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLET 263
P R S PE QV + + + Q +PQ+ + DF V++ T
Sbjct: 275 PLRDSSKAPETQVSESMQMTQGEAEAEPQRVAEIKEPKTPDFEENVRIRT 324
>SB_25754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.1 bits (57), Expect = 9.7
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -3
Query: 401 VVLVITDCLQITLLLSLNVVTSFI*SFVASVGSLFLIETDNGDVGTGLQLDFRSEVIDWF 222
VV +I + + S N V I S L D+ DVG G D I W
Sbjct: 264 VVKLIMSAKSLPPVKSRNTVAEIIGSKYPEQVVLVSGHLDSWDVGEGAMDDGGGAFISWQ 323
Query: 221 CLSIFLLLGL 192
LSIF + L
Sbjct: 324 ALSIFRQMNL 333
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,857,109
Number of Sequences: 59808
Number of extensions: 383841
Number of successful extensions: 1920
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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