Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d17f
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-5|CAA93851.2| 197|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 29 1.6
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 1.6
AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 29 2.1
AF003385-5|AAB54245.1| 494|Caenorhabditis elegans Hypothetical ... 29 2.1
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 29 2.8
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 29 2.8
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL032647-2|CAA21689.1| 178|Caenorhabditis elegans Hypothetical ... 28 3.7
Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical pr... 28 4.9
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 28 4.9
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 28 4.9
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 28 4.9
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 28 4.9
Z83240-2|CAB05814.2| 360|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z69792-6|CAA93669.2| 398|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z69790-5|CAA93657.2| 398|Caenorhabditis elegans Hypothetical pr... 27 6.5
U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical pr... 27 6.5
U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical pr... 27 8.6
U21317-3|AAA62525.1| 87|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 27 8.6
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 27 8.6
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 27 8.6
>Z70034-5|CAA93851.2| 197|Caenorhabditis elegans Hypothetical
protein C18E9.5 protein.
Length = 197
Score = 32.3 bits (70), Expect = 0.23
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 284 DNGDVGTGLQLDFRSEVIDWFCLSIFLLLGLIVV 183
D+ D G + + RSE++DW + I ++LGL+ +
Sbjct: 13 DDFDYGDNVSIIDRSEIVDWSAIVIKIILGLVFI 46
>Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical
protein F42G4.2 protein.
Length = 429
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 139 QNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNW 258
+NSK + SH N + + PS+ DK SDL N+
Sbjct: 132 KNSKTSSESHKNDSDGSKEPSDNADDKNKPKFNSDLAKNF 171
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 117 QRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETST 269
Q + ++P+QQ P+ N N QQ YR + RP VQ++ T
Sbjct: 23 QMRPVMQPQQQRTMYYPVRTNCQNRCNQQTRYRWNVRPTNIRPNVQVQIRT 73
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 178 TSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTE 315
T+TT P RN +K+N+S +S + T+P + + P E
Sbjct: 422 TTTTPKPVPRNKEKENKSASSTTRGTSTATSTTPKTTTTTTSAPKE 467
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 138 PEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPK-VQLETSTYI---PIIRFDKEQG 305
P+QQ + Q + Y+PQQQ+Y Q P D RP+ V+ YI P R +
Sbjct: 73 PQQQFQRQGQSQYIQQQYRPQQQQYSQ-YPRFDLRPQPVRPVRPVYIASTPASRLSYTER 131
Query: 306 TDGSYKTSYETGNNIQAQ 359
SY E N + +
Sbjct: 132 PQTSYGDEIEDTNYLSGR 149
>AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 114 PQRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRQAKPVDDFRPKVQLE 260
P++K KPE+ E + P QP+Q E +Q D PK Q++
Sbjct: 133 PEKKEEAKPEKPAEPKEPEPAQKQAEQPEQAEEKQ--ETKDAEPKEQVD 179
>AF003385-5|AAB54245.1| 494|Caenorhabditis elegans Hypothetical
protein R08F11.3 protein.
Length = 494
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 212 IFLLLGLIVVEVLFKWELVFHLLFWLQRNLPLG 114
+F +L L++ + +FHLL+W +RNLP G
Sbjct: 1 MFFILVLVLTGISI---YLFHLLYWKRRNLPPG 30
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 139 QNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLK-SNWRPVPTSP 279
QNS T H N S++ SP N N S ++L S R V TSP
Sbjct: 452 QNSLKVTTVHDNTASSSSSPDNSETQNNNLSKITNLNLSIEREVSTSP 499
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 139 QNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLK-SNWRPVPTSP 279
QNS T H N S++ SP N N S ++L S R V TSP
Sbjct: 444 QNSLKVTTVHDNTASSSSSPDNSETQNNNLSKITNLNLSIEREVSTSP 491
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 28.3 bits (60), Expect = 3.7
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Frame = +3
Query: 171 EQNFNNYQPQQQEYRQAKPVD--DFRPKVQLETSTYIPIIR-FDKEQGTDGSYKTSYETG 341
+QN NNYQ Q Q A D++P + Y + FD++QG G Y+ +
Sbjct: 304 DQNQNNYQGQYQGSTLAPSAGEVDYQPFTPSGNTDYNNNAQGFDQQQGQQGQYQQNQNDQ 363
Query: 342 NNIQAQ---EQGYLKTVGD-NQDNTALVQQGSYTYTAPDGQVIT 461
I G T G N N+ VQ TY QV+T
Sbjct: 364 QVIYPSGGVVAGGAVTGGSYNSPNSGYVQAQPQTYPT---QVVT 404
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 28.3 bits (60), Expect = 3.7
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Frame = +3
Query: 171 EQNFNNYQPQQQEYRQAKPVD--DFRPKVQLETSTYIPIIR-FDKEQGTDGSYKTSYETG 341
+QN NNYQ Q Q A D++P + Y + FD++QG G Y+ +
Sbjct: 299 DQNQNNYQGQYQGSTLAPSAGEVDYQPFTPSGNTDYNNNAQGFDQQQGQQGQYQQNQNDQ 358
Query: 342 NNIQAQ---EQGYLKTVGD-NQDNTALVQQGSYTYTAPDGQVIT 461
I G T G N N+ VQ TY QV+T
Sbjct: 359 QVIYPSGGVVAGGAVTGGSYNSPNSGYVQAQPQTYPT---QVVT 399
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 28.3 bits (60), Expect = 3.7
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Frame = +3
Query: 171 EQNFNNYQPQQQEYRQAKPVD--DFRPKVQLETSTYIPIIR-FDKEQGTDGSYKTSYETG 341
+QN NNYQ Q Q A D++P + Y + FD++QG G Y+ +
Sbjct: 322 DQNQNNYQGQYQGSTLAPSAGEVDYQPFTPSGNTDYNNNAQGFDQQQGQQGQYQQNQNDQ 381
Query: 342 NNIQAQ---EQGYLKTVGD-NQDNTALVQQGSYTYTAPDGQVIT 461
I G T G N N+ VQ TY QV+T
Sbjct: 382 QVIYPSGGVVAGGAVTGGSYNSPNSGYVQAQPQTYPT---QVVT 422
>AL032647-2|CAA21689.1| 178|Caenorhabditis elegans Hypothetical
protein Y57A10B.2 protein.
Length = 178
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 160 NSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 324
++H +S T SPS+ + S +S+ K + + ++PLS S + EP+ +T+
Sbjct: 86 STHFVTSSATASPSS------SSSSSSEYKKKVKRLSSNPLSSSTSSSEPSTSTR 134
>Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.8 protein.
Length = 191
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 136 SQNSKWKTNSHLNKTSTTISPSNRNIDKQNQSMTSDLKSNWRPVPTS 276
++ S+ K N L KTS+T +PS +Q S + +N + + S
Sbjct: 45 AKRSRKKANGELPKTSSTAAPSLVRSSRQTDSYVNGTNNNSKKLSAS 91
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 27.9 bits (59), Expect = 4.9
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +3
Query: 117 QRKVSLKPEQQVEDQLPLEQNFNN--YQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRF 290
QR+ +L+ QQ + ++ + ++ Y PQQ Y P +P Q +Y +
Sbjct: 524 QREQALQRFQQQQQEMAMRRHQQQAYYNPQQMGYGAPPPSGPQQPPQQ----SYYGYQQG 579
Query: 291 DKEQGTDGSYKTSYETGN-NIQAQEQGYLKTVGDNQDNTALVQQGSYTY 434
+ Q S + Y+ + + Q Q+Q Y + NQ T VQQ Y
Sbjct: 580 PQSQAPPPS--SQYQQSHASTQQQQQQYYQHYQANQTVTQPVQQAQQQY 626
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 178 TSTTIS--PSNRNIDKQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 309
+ST IS P + + ++ S+ S L S+ PT PLSV++RN+ P
Sbjct: 467 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 514
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 178 TSTTIS--PSNRNIDKQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 309
+ST IS P + + ++ S+ S L S+ PT PLSV++RN+ P
Sbjct: 484 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 531
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 178 TSTTIS--PSNRNIDKQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 309
+ST IS P + + ++ S+ S L S+ PT PLSV++RN+ P
Sbjct: 596 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 643
>Z83240-2|CAB05814.2| 360|Caenorhabditis elegans Hypothetical
protein T23H4.3 protein.
Length = 360
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +3
Query: 219 AKPVDDFRPKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQD 398
+ P+ + RP + + P+ R+ K Q DG+Y Y N E+ +KT +
Sbjct: 49 SSPIRERRPIFRNALLSNSPL-RWSKMQDLDGNYLIPYVISGNYDTVERDTIKTAMEKIA 107
Query: 399 NTALVQ 416
N ++
Sbjct: 108 NNTCIR 113
>Z69792-6|CAA93669.2| 398|Caenorhabditis elegans Hypothetical
protein F40E10.6 protein.
Length = 398
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 168 LEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNN 347
++ +N+ PQ Q+Y Q RP+ Q TST R K G +Y T E+G N
Sbjct: 326 MQDAIHNFHPQYQQYTQHSNAQ--RPQ-QPGTSTSTEEQRMSK-GGAATNYSTMVESGTN 381
>Z69790-5|CAA93657.2| 398|Caenorhabditis elegans Hypothetical
protein F40E10.6 protein.
Length = 398
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 168 LEQNFNNYQPQQQEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNN 347
++ +N+ PQ Q+Y Q RP+ Q TST R K G +Y T E+G N
Sbjct: 326 MQDAIHNFHPQYQQYTQHSNAQ--RPQ-QPGTSTSTEEQRMSK-GGAATNYSTMVESGTN 381
>U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical
protein ZK381.2 protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 309 DGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVITVEYTADEF 485
D YK ++ T ++ + + +D + Y Y+ PD Q +T +T D F
Sbjct: 437 DSFYKDTFVTKIGVRRCPNADICDLPQREDYKCIHSDAQY-YSGPDMQPVTYHFTTDSF 494
>U23510-5|AAY55872.1| 110|Caenorhabditis elegans Hypothetical
protein R12C12.10 protein.
Length = 110
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 291 DKEQGTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSY 428
+ T Y Y GN + + G + VGD+ L+QQGSY
Sbjct: 53 ESSASTTLGYYEQYWQGNGWKTDDAGNVY-VGDDNAKLLLIQQGSY 97
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 132 LKPEQQVEDQLPLEQNFN----NYQPQQQEY-RQAKPVDDFRPKVQLETSTYIPIIRFDK 296
L+ ++QV+DQLP + F+ ++ +++ Y +AK + + R + + I + + K
Sbjct: 718 LEIDKQVQDQLPTSEKFSGKMKGWKMEEKSYFERAKLILEGRGPLDYPVDSLISGLFYSK 777
Query: 297 EQGTDGS 317
E G D +
Sbjct: 778 ECGDDAT 784
>Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical
protein D1054.5 protein.
Length = 395
Score = 27.1 bits (57), Expect = 8.6
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Frame = +3
Query: 273 IPIIRFDKEQGTDGSYK---TSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYT-- 437
IP ++ Q SY +SY + + Q L G N+ +AL QGS+ Y
Sbjct: 140 IPRFQWQSSQNNMTSYGEQGSSYRSTSVEQLFSPPILSANGRNRSESALRPQGSHKYDTI 199
Query: 438 --APDGQVITVEYTAD-EFGFRVSGDHIPTPPP 527
+P +A R+ D P PPP
Sbjct: 200 SFSPSSNQFPGSSSAQCNVEIRLGDDRTPPPPP 232
>U21317-3|AAA62525.1| 87|Caenorhabditis elegans Hypothetical
protein B0495.6 protein.
Length = 87
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 50 HIRNHEAADRNHRSYCRCGGSSP 118
H R + RN YCRCG P
Sbjct: 41 HSRLSNVSSRNEHVYCRCGEREP 63
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 135 KPEQQVEDQLPLEQNFNNYQPQQ-QEYRQAKPVDDFRPKVQLETSTYIPIIRFDKEQ 302
+P+Q + Q +Q +N PQQ Q+ Q P + Q +IP + ++Q
Sbjct: 509 QPQQPQQQQFYNQQQYNAQTPQQVQQVHQQTPQQQVQQPHQPNQQPHIPSQQLPRQQ 565
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 165 PLEQNFNNYQPQQQEYRQAKPVDDFR 242
PL +N NY + +EY + + +DDFR
Sbjct: 270 PLSENGLNYAGKLREYFEKEDLDDFR 295
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 165 PLEQNFNNYQPQQQEYRQAKPVDDFR 242
PL +N NY + +EY + + +DDFR
Sbjct: 276 PLSENGLNYAGKLREYFEKEDLDDFR 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,049,268
Number of Sequences: 27780
Number of extensions: 286953
Number of successful extensions: 1333
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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